Tools & Automation

CLI tools, utilities, converters, workflow automation, and productivity helpers

skills in category: 47,645
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Showing 8,833–8,856 of 47,645 skills

Genomics VariantsA> [!info] What it does > Map GWAS loci to ranked candidate genes using a deterministic multi-skill chain (EFO -> GWAS -> coordinates -> Open Targets L2G/coloc -> eQTL -> burden/coding context), with reproducible tables and optional figures. Use when a user provides a trait/EFO term and/or lead variants and needs locus-to-gene prioritization for downstream biology decisions. **Source:** [skills/locus-to-gene-mapper-skill/SKILL.md](../../../skills/locus-to-gene-mapper-skill/SKILL.md) · **Doma...toolsVotes: 0GitHub stars: 8
Genomics VariantsA> [!info] What it does > Submit compact gnomAD GraphQL requests for frequency, gene constraint, and variant context queries. Use when a user wants concise gnomAD summaries **Source:** [skills/gnomad-graphql-skill/SKILL.md](../../../skills/gnomad-graphql-skill/SKILL.md) · **Domain:** [Genomics, Variants & Population Genetics](../../maps/genomics-variants.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)toolsVotes: 0GitHub stars: 8
Genomics VariantsA> [!info] What it does > Submit compact Genebass gene burden requests for one Ensembl gene ID and one burden set. Use when a user wants concise Genebass PheWAS summaries **Source:** [skills/genebass-gene-burden-skill/SKILL.md](../../../skills/genebass-gene-burden-skill/SKILL.md) · **Domain:** [Genomics, Variants & Population Genetics](../../maps/genomics-variants.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)toolsVotes: 0GitHub stars: 8
Genomics VariantsA> [!info] What it does > Submit compact ClinVar Clinical Tables and NCBI Variation requests for search, VCV, RCV, SCV, and RefSNP lookups. Use when a user wants variant-level summaries or identifier mapping **Source:** [skills/clinvar-variation-skill/SKILL.md](../../../skills/clinvar-variation-skill/SKILL.md) · **Domain:** [Genomics, Variants & Population Genetics](../../maps/genomics-variants.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)toolsVotes: 0GitHub stars: 8
Wix Design SystemBWix Design System component reference. Use when building UI with @wix/design-system, choosing components, checking props and examples, or writing tests with component testkits. Triggers on "what component", "how do I make", "WDS", "show me props", "testkit", "driver", or component names like Button, Card, Modal, Box, Text.toolsbashnodeVotes: 0GitHub stars: 8
Vmd Mdanalysis VizAHeadless molecular visualization and trajectory analysis with VMD, MDAnalysis, and GROMACS. Use this skill when Claude needs to: (1) Render proteins/molecules (cartoon, licorice, VDW, surface) headlessly via vmd-python or VMD text mode, (2) Analyze MD trajectories (RMSD, RMSF, radius of gyration, hydrogen bonds, SASA, secondary structure, contacts), (3) Work with PDB/GRO/PSF/XTC/DCD/TRR structure and trajectory formats, (4) Drive GROMACS command-line analysis tools and parse XVG output.toolspythongoVotes: 0GitHub stars: 8
Skills DirectorySkills Directory 3 slots · $399/mo · one ad per page · sponsors can never buy grades.See placements
View RefactorARefactor macOS SwiftUI views and scenes into stable structure. Use when splitting large views, tightening scene state, or narrowing AppKit escapes.toolsgoswiftVotes: 0GitHub stars: 8
Viennarna Structure PredictionAPredict RNA secondary structure, MFE folding, base-pair probabilities, RNA-RNA interactions via ViennaRNA Python bindings. Pipeline: sequence → MFE → partition function and pair-probability matrix → dot-bracket → duplex. Use for siRNA/sgRNA targeting, ribozyme design, RNA accessibility. Use RNAfold CLI for batch use without Python.toolspythongoVotes: 0GitHub stars: 8
Test TriageATriage macOS tests across Xcode and SwiftPM. Use when narrowing failures, explaining assertions or crashes, or separating setup from regressions.toolsgoswiftVotes: 0GitHub stars: 8
Template ValidationAValidates custom dotnet new templates for correctness before publishing. Catches missing fields, parameter bugs, shortName conflicts, constraint issues, and common authoring mistakes that cause templates to fail silently. USE FOR: checking template.json files for errors before publishing or testing, diagnosing why a template doesn't appear after installation, reviewing template parameter definitions for type mismatches and missing defaults, finding shortName conflicts with dotnet CLI commands...toolsgoc#Votes: 0GitHub stars: 8
Template Smart DefaultsAApplies cross-parameter default rules when creating .NET projects with dotnet new, filling gaps consistently without overriding values the user set explicitly. USE FOR: choosing which target framework to pair with native AOT, deciding whether to keep HTTPS when authentication is enabled, recognizing that controllers and minimal-API flags are mutually exclusive, filling unset related parameters during project creation, explaining why a default was applied and ensuring an explicit user value is...toolsapiVotes: 0GitHub stars: 8
Template ComparisonACompares two or more dotnet new templates side by side to help users choose between them based on parameters, feature support, frameworks, and classifications. USE FOR: deciding between similar templates (webapi vs webapp, blazor vs blazorwasm, console vs worker), producing a side-by-side comparison of parameters and feature support, understanding how templates differ before creating a project. DO NOT USE FOR: creating a project from a template (use template-instantiation), authoring or valid...toolsgobashVotes: 0GitHub stars: 8
Template AuthoringAGuides creation and validation of custom dotnet new templates from existing projects. Generates a .template.config/template.json that preserves the source project's conventions. USE FOR: creating a reusable dotnet new template from an existing project, bootstrapping .template.config/template.json with correct identity, shortName, parameters, and post-actions, adding parameters or conditional content to a template you are authoring, validating the template.json you are authoring before publish...toolsc#bashVotes: 0GitHub stars: 8
TelemetryAAdd and verify lightweight macOS runtime telemetry. Use when wiring Logger events or inspecting logs for windows, sidebars, menus, and actions.toolsgoswiftVotes: 0GitHub stars: 8
Swiftui PatternsABuild macOS SwiftUI scenes and components with desktop patterns. Use when shaping windows, commands, toolbars, settings, split views, or inspectors.toolsgoswiftVotes: 0GitHub stars: 8
Swiftpm MacosABuild, run, and test SwiftPM macOS packages and executables. Use when the repo is package-first or has no Xcode project.toolsswiftrailsVotes: 0GitHub stars: 8
Stable Baselines3AProduction-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm implementations. Best for single-agent RL with Gymnasium environments. For high-performance parallel training, multi-agent systems, or custom vectorized environments, use pufferlib instead.toolspythongoVotes: 0GitHub stars: 8
SourmashAMinHash/FracMinHash sketching for alignment-free comparison of genomes and metagenomes. Use for fast all-vs-all genome similarity and ANI estimation across thousands of genomes without alignment, taxonomic classification of metagenomes against GTDB/NCBI reference databases (sourmash gather/tax), and sequencing-cohort QC (contamination or duplicate detection). Complements upstream assembly/QC pipelines (snakemake-workflow-engine, nextflow) and feeds downstream phylogenetics; distinct from alig...toolspythonrustVotes: 0GitHub stars: 8
Shopify Polaris Admin ExtensionsAAdd custom actions and blocks from your app at contextually relevant spots throughout the Shopify Admin. Admin UI Extensions also supports scaffolding new adminextensions using Shopify CLI commands.toolstypescriptrustVotes: 0GitHub stars: 8
Setup Local SdkBInstall a .NET SDK locally for safe preview testing, specific-version pinning, or reproducible team setups — without modifying the system-wide installation. USE FOR: trying .NET previews safely, testing specific SDK versions, installing MAUI or other workloads on a preview, updating or replacing an existing local SDK, creating reproducible team/CI install scripts, configuring global.json paths. DO NOT USE FOR: system-wide SDK installs, .NET hosts older than 10, runtime-only installs, or proje...toolsshellbashVotes: 0GitHub stars: 8
Sequence AnalysisAAnalyze DNA/RNA/protein sequences. Use when the user provides a sequence and asks for analysis, translation, GC content, ORFs, motifs, restriction sites, or primer design. Triggers on "sequence", "translate", "GC content", "ORF", "primer", "restriction", "complement", "reverse complement".toolspythonbashVotes: 0GitHub stars: 8
Security Diff ScanAUse when the user asks for a security review of a pull request, commit, branch diff, working-tree patch, or other Git-backed change set.toolspythongoVotes: 0GitHub stars: 8
RoverCGuide for using Apollo Rover CLI to manage GraphQL schemas and federation. Use this skill when: (1) publishing or fetching subgraph/graph schemas, (2) composing supergraph schemas locally or via GraphOS, (3) running local supergraph development with rover dev, (4) validating schemas with check and lint commands, (5) configuring Rover authentication and environment, (6) exploring or searching a graph's schema for agent-driven discovery (rover schema describe / rover schema search).toolsshellbashVotes: 0GitHub stars: 8
Radare2AUse this skill whenever the user wants to analyze binaries with radare2/r2 from the command line, including reverse engineering, disassembly, function analysis, strings/import inspection, patching, binary diffing, hex inspection, or r2 scripting. Also use it when the user mentions PE/ELF/Mach-O/DEX/WASM files together with CLI analysis, `rabin2`, `rasm2`, `radiff2`, `r2pipe`, or asks for radare2 command help on Windows/Linux/macOS.toolsshellsqlVotes: 0GitHub stars: 8