Use this skill to integrate a deterministic predator-prey ordinary differential equation with `scipy.integrate.solve_ivp` and return a compact trajectory summary.
Scanned 9/8/2026
Install to Claude Code
npx -y skills add ma-compbio-lab/SkillFoundry --skill scipy-ode-simulation-starter --agent claude-codeInstalls into .claude/skills of the current project.
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# SciPy ODE Simulation Starter
Use this skill to integrate a deterministic predator-prey ordinary differential equation with `scipy.integrate.solve_ivp` and return a compact trajectory summary.
## What it does
- Solves a Lotka-Volterra system with fixed parameters and deterministic initial conditions.
- Reports peak times, peak populations, and the final state from the simulated trajectory.
- Produces a small JSON summary that is stable enough for repository smoke tests.
## When to use it
- You need a runnable starter for `ODE / SDE simulation workflows`.
- You want a minimal verified example of `solve_ivp` before building larger simulation workflows.
## Example
```bash
slurm/envs/scientific-python/bin/python skills/scientific-computing-and-numerical-methods/scipy-ode-simulation-starter/scripts/run_scipy_ode_simulation.py \
--out scratch/scipy-ode/lotka_volterra_summary.json
```
## Verification
- Skill-local tests: `python3 -m unittest discover -s skills/scientific-computing-and-numerical-methods/scipy-ode-simulation-starter/tests -p 'test_*.py'`
- Repository smoke: `python3 -m unittest tests.smoke.test_phase30_empty_domain_seed_skills -v`
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