Use this skill to render a small deterministic Jupyter notebook into an HTML report with Quarto.
Scanned 9/8/2026
Install to Claude Code
npx -y skills add ma-compbio-lab/SkillFoundry --skill quarto-notebook-report-starter --agent claude-codeInstalls into .claude/skills of the current project.
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# Quarto Notebook Report Starter
Use this skill to render a small deterministic Jupyter notebook into an HTML report with Quarto.
## What it does
- Copies a tiny example notebook into an isolated temporary workspace.
- Executes the notebook through Quarto's Jupyter engine.
- Produces a standalone HTML report.
- Returns compact JSON confirming that the expected title and executed output are present.
## When to use it
- You need a local starter for notebook-to-report conversion.
- You want a verified Quarto path that hides the repo-managed conda activation quirks.
## Example
```bash
python3 skills/visualization-and-reporting/quarto-notebook-report-starter/scripts/render_quarto_notebook_report.py \
--input skills/visualization-and-reporting/quarto-notebook-report-starter/examples/toy_report.ipynb \
--html-out scratch/quarto/toy_report.html \
--summary-out scratch/quarto/toy_report_summary.json
```
## Verification
- Skill-local tests: `python3 -m unittest discover -s skills/visualization-and-reporting/quarto-notebook-report-starter/tests -p 'test_*.py'`
- Repository smoke: `python3 -m unittest tests.smoke.test_phase24_frontier_closure_skills -v`
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