Claude Skills by stanfish06

> [!info] What it does > Submit compact bioRxiv and medRxiv API requests for details, publication-linkage, and DOI lookups. Use when a user wants concise preprint metadata summaries **Source:** [skills/biorxiv-skill/SKILL.md](../../../skills/biorxiv-skill/SKILL.md) · **Domain:** [Literature Search & Knowledge Discovery](../../maps/literature-discovery.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)

> [!info] What it does > Submit compact NCBI PMC Open Access requests for article/file availability metadata. Use when a user wants concise PMC Open Access summaries; save raw XML only on request. **Source:** [skills/ncbi-pmc-skill/SKILL.md](../../../skills/ncbi-pmc-skill/SKILL.md) · **Domain:** [Literature Search & Knowledge Discovery](../../maps/literature-discovery.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)

> [!info] What it does > Submit, poll, and summarize NCBI BLAST Common URL API jobs (Blast.cgi) for nucleotide or protein sequences. Use when a user wants RID status, BLAST results, or compact top-hit summaries; fetch raw Text/JSON2 only on request. **Source:** [skills/ncbi-blast-skill/SKILL.md](../../../skills/ncbi-blast-skill/SKILL.md) · **Domain:** [Sequence Analysis, NGS & Phylogenetics](../../maps/sequence-phylogenetics.md) · **Table:** [skills.base](../../skills.base) · **Index:**...

> [!info] What it does > Submit compact RNAcentral API requests for RNA entry browsing, single-entry lookup, and cross-reference retrieval. Use when a user wants concise RNAcentral summaries **Source:** [skills/rnacentral-skill/SKILL.md](../../../skills/rnacentral-skill/SKILL.md) · **Domain:** [Sequence Analysis, NGS & Phylogenetics](../../maps/sequence-phylogenetics.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)

> [!info] What it does > Submit compact Bgee SPARQL requests for healthy wild-type expression metadata and ontology-aware lookup patterns. Use when a user wants concise Bgee summaries; save raw results only on request. **Source:** [skills/bgee-skill/SKILL.md](../../../skills/bgee-skill/SKILL.md) · **Domain:** [Single-Cell, RNA-seq & Functional Genomics](../../maps/single-cell-rnaseq.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)

> [!info] What it does > Submit compact ENCODE REST API requests for object lookups, portal-style search, and metadata retrieval. Use when a user wants concise ENCODE summaries **Source:** [skills/encode-skill/SKILL.md](../../../skills/encode-skill/SKILL.md) · **Domain:** [Single-Cell, RNA-seq & Functional Genomics](../../maps/single-cell-rnaseq.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)

> [!info] What it does > Observe the user's screen via screenpipe, detect repeated research workflows, match them against existing scientific-agent-skills, and draft new skills (or composition recipes that chain existing ones) for the patterns not yet covered. Use when the user asks to analyze their recent work and propose skills based on what they actually do. Requires the screenpipe daemon (https://github.com/screenpipe/screenpipe) running locally on port 3030 — the skill has no other data ...

> [!info] What it does > Evaluate a local Codex skill in engineer-friendly terms. Use when the user says "evaluate this skill", "give me an analysis of the game dev skill", "audit this skill", "why did this score that way", "what should I fix first", or asks for a skill-specific report before benchmarking it. **Source:** [skills/evaluate-skill/SKILL.md](../../../skills/evaluate-skill/SKILL.md) · **Domain:** [Vault, Skills & Workflow Meta](../../maps/vault-meta.md) · **Table:** [skills.bas...

> [!info] What it does > Turn plugin-eval findings into a concrete rewrite brief for a Codex skill. Use when the user already evaluated a skill and now wants Codex to improve it, especially after asking what to fix first. **Source:** [skills/improve-skill/SKILL.md](../../../skills/improve-skill/SKILL.md) · **Domain:** [Vault, Skills & Workflow Meta](../../maps/vault-meta.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)

> [!info] What it does > Minimal example skill for plugin-eval tests. Use when the user wants a compact demonstration of a well-structured skill. **Source:** [skills/minimal-skill/SKILL.md](../../../skills/minimal-skill/SKILL.md) · **Domain:** [Vault, Skills & Workflow Meta](../../maps/vault-meta.md) · **Table:** [skills.base](../../skills.base) · **Index:** [Skills Index](../../index.md)