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Claude Skills by stanfish06
github.com/stanfish061,773 skills143 installs3,463 views
- Latex PostersCreate professional research posters in LaTeX using beamerposter, tikzposter, or baposter. This is the default poster skill for conference presentations, academic posters, and scientific communication. Includes layout design, color schemes, multi-column formats, figure integration, and poster-specific best practices. For editable PowerPoint output, use pptx-posters (HTML/CSS-based) or poster-presentation (python-pptx-based) instead.Votes: 0GitHub stars: 8
- Launch Readiness OrchestratorLaunch Readiness Orchestrator skill for Datasite deal rooms. Use this skill whenever a deal team wants a single pre-go-live readiness check across their data room — combining gap analysis, document quality audit, and risk review into one consolidated "is the room ready?" view. Triggers include: "are we ready to go live", "launch readiness check", "pre-launch audit", "data room readiness", "can we launch", "is the data room ready", "run a full readiness check", "go-live checklist", "pre-launch...Votes: 0GitHub stars: 8
- Ld 1000g Region ComputeCompute pairwise r² between a lead variant and every variant in a window using the 1000 Genomes Phase 3 GRCh38 reference panel, ancestry-stratified. Use when an agent needs LD coloring for a regional plot or LD pruning around a candidate causal variant. Single client (on-demand region fetch from EBI 1000G FTP); no multi-GB cold-start.Votes: 0GitHub stars: 8
- Life Cycle Assessment AnalystExpert-thinking profile for Life-Cycle Assessment Analyst (attributional/consequential LCA / inventory & impact assessment / allocation & uncertainty / EPD critical review (ISO 14040/14044, EN 15804)): Reasons from functional unit, attributional-versus- consequential framing, and ISO 14044 allocation hierarchy through openLCA, SimaPro, Brightway2, ecoinvent, and LCIA methods like TRACI and EF 3.0 while treating allocation-driven ranking flips, biogenic-versus-fossil carbon mistagging, cut-off...Votes: 0GitHub stars: 8
- LimnologistExpert-thinking profile for Limnologist (field / observational / physical limnology / lake ecology / paleolimnology): Reasons from stratification, Schmidt stability, and nutrient–light coupling; profiles with CTD/EXO and Carlson TSI components; models with rLakeAnalyzer and GLM while treating internal P loading, sensor fouling, and spatial pseudoreplication as first-class failure modes.Votes: 0GitHub stars: 8
- Liquid GlassImplement and review macOS SwiftUI Liquid Glass UI. Use when adopting system glass, removing conflicting custom chrome, or building glass surfaces.Votes: 0GitHub stars: 8
- Lit Synthesizer'Search PubMed and bioRxiv for bioinformatics literature, synthesise results into a structured report, and buildVotes: 0GitHub stars: 8
- LiteparseLocal document and PDF parsing with spatial text and bounding boxes. Use for extracting text from PDFs, DOCX, Office files, and images; OCR on scans; layout-preserved JSON for RAG; batch-ingesting paper folders; or page screenshots for multimodal agents — even when the user does not name liteparse. Prefer over MarkItDown when you need bboxes, fast local parsing, or PNG page renders; prefer over the pdf skill for merge/split/forms.Votes: 0GitHub stars: 8
- Literature ReviewConduct comprehensive, systematic literature reviews using multiple academic databases (PubMed, arXiv, bioRxiv, Semantic Scholar, etc.). Use when conducting systematic literature reviews, meta-analyses, research synthesis, or comprehensive literature searches across biomedical, scientific, and technical domains. Creates professionally formatted markdown documents and PDFs with verified citations in multiple citation styles (APA, Nature, Vancouver, etc.).Votes: 0GitHub stars: 8
- Litigation Update PostWrites public-facing litigation updates — blog posts, client alerts, LinkedIn/X posts — on a federal case or legal development. Use to \"write a blog post about…,\" \"draft a client alert on…\"Votes: 0GitHub stars: 8
- Llamaindex DevelopmentExpert guidance for LlamaIndex development including RAG applications, vector stores, document processing, query engines, and building production AI applications.Votes: 0GitHub stars: 8
- Llm Agent Security RedteamLLM and agent security red teaming with agentic-actions-auditor, supply-chain-risk-auditor, semgrep, codeql, and sarif-parsing. Use for prompt injection, tool misuse, data exfiltration, excessive agency, insecure output handling, supply-chain risk, retrieval poisoning, and OWASP LLM Top 10 style threat modeling.Votes: 0GitHub stars: 8
- Llm Observability EvalsLLM and agent observability, tracing, and evaluation workflows with langfuse, phoenix-cli, and phoenix-evals. Use when instrumenting Langfuse, Phoenix, OpenTelemetry GenAI traces, eval datasets, prompt experiments, latency/cost debugging, trace scoring, or regression testing agent behavior.Votes: 0GitHub stars: 8
- Llm SecurityUse for authorized security assessment of LLM applications and AI agents, including prompt injection, tool abuse, RAG exposure, memory poisoning, and model supply-chain risks.Votes: 0GitHub stars: 8
- Locuscompare Region RenderRender a 4-panel regional LocusCompare diagnostic for one (lead variant, exposure study, outcome study) tuple - overlays GWAS Manhattan, QTL Manhattan, GENCODE gene track, and cross-trait scatter colored by LD r². Use when an agent needs visual confirmation that two GWAS / QTL signals share the same causal variant (the Liu 2019 LocusCompare convention). Inputs: lead variant + two pre-fetched harmonised sumstats slices (or eQTL Catalogue / GWAS Catalog identifiers for bundled fetch). Output: P...Votes: 0GitHub stars: 8
- Logfire InstrumentationAdd Pydantic Logfire observability to applications and send as much useful telemetry as possible. Use this skill whenever the user asks to "add logfire", "instrument with logfire", "add observability", "add tracing", "configure logfire", "add monitoring", "set me up properly", "send as much data as would be useful", "maximize observability", "monitor my host/infrastructure/Kubernetes", or mentions Logfire in any context. Supports Python, JavaScript/TypeScript, and Rust, plus host/infrastructu...Votes: 0GitHub stars: 8
- Logfire QueryQuery and analyze Logfire telemetry data — traces, logs, spans, metrics, summaries, and SQL results. Use this skill when the user asks to "query logfire", "search traces", "find logs", "query data", "search spans", "look up errors in logfire", "get metrics from logfire", "analyze telemetry", "summarize errors", "find root cause", or add Logfire querying capabilities to code. Do not use this skill for direct Logfire UI, browser, live-view, Explore-page, or link-opening requests; use logfire-ui...Votes: 0GitHub stars: 8
- Logfire UiOpen or return Logfire project pages, live views, trace links, and Explore pages in the Codex browser without querying telemetry first. Use this skill when the user asks to "open in Logfire", "show in the live view", "open Explore", "open the UI", "show in Codex", "use the browser", "give me a link", or asks for a Logfire GUI/browser/live-view presentation of a project, time range, service, span, trace, log, or filter. If "show" or "view" wording is ambiguous, ask whether the user wants a UI ...Votes: 0GitHub stars: 8
- LogicianExpert-thinking profile for Logician (proof theory / model theory / computability / set theory / formal verification (Lean, Coq, Z3)): Expert profile for logician — see AGENTS.md for field-specific methods and failure modes.Votes: 0GitHub stars: 8
- Loki Label AnalyzerExpert evaluator for Grafana Loki label strategy. Audits, designs, and improves label schemas using cardinality scoring, access-pattern alignment, static vs. dynamic label rules, and consistency checks. Use when the user asks to evaluate, audit, design, or improve a Loki label strategy — or asks why their Loki queries are slow.Votes: 0GitHub stars: 8
- Loop MeGrill me about specs for the workflows I want to build, within this workspace.Votes: 0GitHub stars: 8
- Low Temperature PhysicistExpert-thinking profile for Low-Temperature Physicist (experimental / cryogenic / condensed-matter & quantum transport): Reasons from kT budgets, He-3/He-4 dilution refrigeration, and BCS/GL superconductivity; measures Tc, QHE, and Landauer conductance with lock-in/SQUID workflows while treating wiring heat loads, Kapitza resistance, flux trapping, TLS dielectric loss, and sample-vs-MXC thermometer mismatch as first-class failure modes.Votes: 0GitHub stars: 8
- Machine Learning EngineerExpert-thinking profile for Machine Learning Engineer (production ML / MLOps / feature stores & serving): Reasons from feature-store point-in-time joins (Feast/Tecton), Airflow/Kubeflow training pipelines, MLflow registry, Triton/TorchServe/BentoML serving, Evidently/WhyLabs drift and PSI, shadow/canary/A/B rollouts, inference SLAs, and reproducible training hashes while treating train–serve skew, label leakage, and...Votes: 0GitHub stars: 8
- Machine Learning ResearcherExpert-thinking profile for Machine Learning Researcher (computational / empirical & theoretical machine learning research): Reasons from population risk, double descent, and inductive bias; enforces sacred test sets, hierarchical ablations, nested CV, and HELM/Dynabench-aware benchmarking; reports with NeurIPS and Pineau reproducibility checklists while treating leakage, meta-overfitting, benchmark contamination, Goodhart gaming, and seed...Votes: 0GitHub stars: 8
- Macos ReverseUse for authorized macOS and Mach-O reverse engineering including codesign, Objective-C/Swift recovery, endpoint security surfaces, and Apple platform malware analysis.Votes: 0GitHub stars: 8
- MagicpathUse when the user mentions MagicPath, designs, UI components, themes, canvas selections, or repo-to-canvas UI work; run magicpath-ai to search, inspect, install, or author components.Votes: 0GitHub stars: 8
- Malware AnalysisUse when analyzing suspected malware through static, dynamic, and behavioral techniques, including IOC extraction, YARA or Sigma rules, sandboxing, and anti-analysis behavior.Votes: 0GitHub stars: 8
- MammalogistExpert-thinking profile for Mammalogist (field / observational / museum systematics / telemetry): Reasons from mammalian life history and detectability-limited sampling through ASM MDD taxonomy, Sherman/camera-trap/SCR survey design, occupancy and SECR models, bat acoustic validation, and museum voucher discipline while treating trap heterogeneity, camera autocorrelation, closure violation, and WNS decontamination...Votes: 0GitHub stars: 8
- Managed Deep AgentsINVOKE THIS SKILL when building, testing, or deploying Managed Deep Agents in LangSmith with the mda CLI. Walks a user through their first agent end to end — interviewing them about what they want to build, mapping it onto what MDA can actually do, then scaffolding and deploying it. Covers the file-based project layout; define_deep_agent / defineDeepAgent; instructions, skills, memory, identity, tools, middleware, sandboxes, schedules, channels, and evals; mda init/build/dev/deploy/logs/delet...Votes: 0GitHub stars: 8
- Manufacturing EngineerExpert-thinking profile for Manufacturing Engineer (process planning / CNC-CAM / GD&T / quality launch (APQP/PPAP, MSA/SPC) / multi-process (machining, welding, casting)): Reasons from process physics, capability, and cost through Shercliff-Lovatt process selection, ASME Y14.5 GD&T, CAM simulation, and AIAG APQP/PPAP with MSA-gated SPC capability, treating high %GRR masquerading as variation, false Cpk on unstable or short runs, datum-scheme mismatch, and uncontrolled ECN tweaks as...Votes: 0GitHub stars: 8
- MarimoReactive Python notebooks stored as pure .py files — cells form a dependency DAG, so changing one cell automatically reruns its dependents (or marks them stale under the lazy runtime) and hidden state cannot exist. Covers the notebook file format, marimo edit/run/export CLI, mo.ui interactive elements, SQL cells, running notebooks as apps or scripts, and sandboxed notebooks with PEP 723 inline dependencies. Use when creating or editing marimo notebooks, building interactive data apps or dashb...Votes: 0GitHub stars: 8
- Marine BiologistExpert-thinking profile for Marine Biologist (field / shipboard / biological oceanography / eDNA & observing systems): Reasons from water-mass stratification, CTD–Niskin and CalCOFI-style net tows, BRUV, and MiFish/COI eDNA through OBIS/WoRMS/GBIF and ARGO/BGC-Argo; treats mesopelagic DVM, hypoxia/Ω_aragonite constraints, fluorometer quenching, BRUV MaxN bias, and transect pseudoreplication as first-class failure modes.Votes: 0GitHub stars: 8
- Marine EngineerExpert-thinking profile for Marine Engineer (shipboard / design / machinery systems / class compliance): Reasons from propulsion thermodynamics, shaft BPF/torsional barred speeds, central LT/HT cooling, class machinery surveys, and ISO 15016:2025 sea trials while treating cat fines liner wear, scavenge fire, purifier mis-set, blackout PMS logic, and tropical SW fouling as first-class failure modes.Votes: 0GitHub stars: 8
- Marine GeologistExpert-thinking profile for Marine Geologist (ship/AUV survey / seismic + multibeam / IODP coring + stratigraphy / marine geohazards + seafloor resources): Reasons from stratigraphy, sedimentary processes, geophysical facies, and age control through multibeam bathymetry, 2D/3D seismic, piston/IODP cores tied via synthetic seismograms, and CSF-A age models while treating bad-SVP false scarps, BSRs mimicking free gas, gas-charged push-down faking structural offset, and...Votes: 0GitHub stars: 8
- MarkitdownConvert files and office documents to Markdown. Supports PDF, DOCX, PPTX, XLSX, images (with OCR), audio (with transcription), HTML, CSV, JSON, XML, ZIP, YouTube URLs, EPubs and more.Votes: 0GitHub stars: 8
- Mass SpectrometristExpert-thinking profile for Mass Spectrometrist (clinical / research): Reasons from ion formation, m/z resolution and mass accuracy, fragmentation, and calibrated ion statistics through ESI/APCI/MALDI tuning, CID/HCD/ETD MS/MS, isotope-pattern formula assignment, and spectral libraries (NIST, mzCloud, GNPS) under FDA/ICH M10/MSI tiers, while treating matrix suppression...Votes: 0GitHub stars: 8
- MatchmsSpectral similarity and compound identification for metabolomics. Use for comparing mass spectra, computing similarity scores (cosine, modified cosine), and identifying unknown compounds from spectral libraries. Best for metabolite identification, spectral matching, library searching. For full LC-MS/MS proteomics pipelines use pyopenms.Votes: 0GitHub stars: 8
- Materials ChemistExpert-thinking profile for Materials Chemist (wet-lab / solid-state & solution synthesis / diffraction & spectroscopy): Reasons from Kröger–Vink defect equilibria, soft-chemistry routes (sol-gel, hydrothermal, ALD), and structure–property links; validates with GSAS-II/TOPAS Rietveld QPA, GIPAW ssNMR, ICSD/COD/Materials Project, and XPS/BET protocols while treating preferred orientation, AdC mis-referencing, degas artifacts, and...Votes: 0GitHub stars: 8
- Materials PhysicistExpert-thinking profile for Materials Physicist (experimental / thin-film & bulk / spectroscopy–transport): Reasons from band structure, defects, strain, and Landau order parameters; integrates HRXRD/RSM, ARPES, TEM/4D-STEM, van der Pauw transport, and SQUID/MOKE with Materials Project/VASP while treating matrix-element ARPES artifacts, substrate-dominated GIXRD, contact-resistance Hall errors, and DFT gap overclaim as...Votes: 0GitHub stars: 8
- Materials ScientistExpert-thinking profile for Materials Scientist (laboratory / computational / processing–structure–property): Reasons from CALPHAD phase diagrams, Scheil solidification, and Hall–Petch microstructure–property links; validates with XRD Rietveld QPA, EBSD, TEM/STEM, and ASTM mechanical testing while treating preferred orientation, FIB Ga artifacts, EBSD overlap, and Rietveld overfitting as first-class failure modes.Votes: 0GitHub stars: 8
- Mathematical AnalystExpert-thinking profile for Mathematical Analyst (proof-theoretic / PDE & functional analysis / harmonic analysis / operator spectral theory / symbolic-numerical (SymPy, FEniCS, Lean)): Reasons from function-space topology, convergence modes, and constant- dependent inequalities (Hölder, Sobolev, Gronwall) through compactness theorems (Rellich-Kondrachov, Banach-Alaoglu), Calderon-Zygmund and Schauder estimates, and Lax-Milgram while treating limit-integral swaps without dominated convergence...Votes: 0GitHub stars: 8
- Mathematical ModelerExpert-thinking profile for Mathematical Modeler (mechanistic modeling / ODE-PDE & agent-based / identifiability & UQ / calibration & inverse problems): Reasons from nondimensionalization, conservation/positivity laws, and minimal-viable model structure through mechanistic ODE/PDE, stochastic, and agent-based formulations, profile-likelihood and Fisher-information identifiability, and Sobol/Morris sensitivity analysis, while treating sloppy unidentifiable parameters...Votes: 0GitHub stars: 8
- Mathematical PhysicistExpert-thinking profile for Mathematical Physicist (theoretical / axiomatic & constructive mathematical physics): Reasons from Hilbert-space domains, Wightman/OS and Haag–Kastler axioms, constructive QFT, Gibbs measures, and spectral/scattering theory; uses Reed–Simon, Glimm–Jaffe, MathSciNet/math-ph, while treating wrong self- adjoint extensions, invalid Wick rotation, limit-order swaps, and lattice-as-continuum claims as...Votes: 0GitHub stars: 8
- Mathematical StatisticianExpert-thinking profile for Mathematical Statistician (theoretical / computational): Reasons from LAN, empirical processes, and influence functions; proves M/Z-estimator limits, minimax rates (Fano/Le Cam/Assouad), and semiparametric efficiency while validating with ADEMP simulations and treating naive bootstrap, non-Donsker classes, and debiasing sparsity violations as first-class failure modes.Votes: 0GitHub stars: 8
- Matlab Analyze DataAnalyze data using MATLAB. Use when the task involves tables, timetables, time-series data, numeric arrays, sensor matrices, or gridded data — including but not limited to exploring, filtering, sorting, cleaning, transforming, aggregating, smoothing, padding, trimming, and answering questions about data. MATLAB provides extensive, easy-to-use built-in functions for these workflows with no additional products required.Votes: 0GitHub stars: 8
- Matlab Analyze DependenciesAnalyze the effective toolbox file set to produce a Dependency Manifest — classify all transitive dependencies as included, product, add-on, or external-unresolved, then present resolution options with tradeoffs. Use after matlab-define-toolbox-api when the spec is approved.Votes: 0GitHub stars: 8
- Matlab Assess ToolboxAssess toolbox readiness and suggest improvements — validates help text, tests, coverage, code issues, dependencies, and function signatures. Produces a punch list and can execute fixes via delegate skills on user approval. Use before packaging or when asked to improve a toolbox.Votes: 0GitHub stars: 8
- Matlab Build AppBuild MATLAB apps from requirements to working code. Asks discovery questions (or skips them when the path is known), recommends UIFigure or UIHTML path, identifies layout archetype (Dashboard, Explorer, Tabbed, Wizard, Canvas), produces an implementation plan, and executes the build. Use when a user wants to build a MATLAB app, create a GUI, make an interactive tool, build a uifigure app, build a uihtml app, or asks which approach to use. Also use when user describes spatial layout needs: da...Votes: 0GitHub stars: 8
- Matlab Build ChartCreate and customize MATLAB charts and plots. Plot types (line, scatter, bar, histogram, heatmap, surface), axes configuration, annotations, data tips, interactive plots, animation, multiple axes with tiledlayout, colororder, and performance optimization. Works for standalone figures, Live Scripts, and uifigure apps. Use when plotting data, customizing axes, adding annotations or interactivity, animating charts, or arranging multiple axes. Triggers: plot, chart, graph, axes, uiaxes, annotatio...Votes: 0GitHub stars: 8
- Matlab Build ToolboxExecute the build plan — introspect buildfile.m, run its dependency chain, and produce the .mltbx toolbox package. Mechanical execution with no human checkpoint. Works with any buildplan shape.Votes: 0GitHub stars: 8