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Claude Skills by majiayu000
github.com/majiayu00015,497 skills907 installs34,333 views
- Spatial Communication Gptomics Bioskills 2Analyze cell-cell communication in spatial transcriptomics data using ligand-receptor analysis with Squidpy. Infer intercellular signaling, identify communication pathways, and visualize interaction networks. Use when analyzing cell-cell communication in spatial context.Votes: 0GitHub stars: 666
- Spatial Deconvolution Gptomics Bioskills 2Estimate cell type composition in spatial transcriptomics spots using reference-based deconvolution. Use cell2location, RCTD, SPOTlight, or Tangram to infer cell type proportions from scRNA-seq references. Use when estimating cell type composition in spatial spots.Votes: 0GitHub stars: 666
- Spatial DomainsIdentify spatial domains and tissue regions in spatial transcriptomics data using Squidpy and Scanpy. Cluster spots considering both expression and spatial context to define anatomical regions. Use when identifying tissue domains or spatial regions.Votes: 0GitHub stars: 666
- Spatial Neighbors Gptomics Bioskills 2Build spatial neighbor graphs for spatial transcriptomics data using Squidpy. Compute k-nearest neighbors, Delaunay triangulation, and radius-based connectivity for downstream spatial analyses. Use when building spatial neighborhood graphs.Votes: 0GitHub stars: 666
- Spatial PipelineEnd-to-end spatial transcriptomics workflow for Visium/Xenium data. Covers data loading, preprocessing, spatial analysis, domain detection, and visualization with Squidpy. Use when analyzing spatial transcriptomics data.Votes: 0GitHub stars: 666
- Spatial Preprocessing Gptomics Bioskills 2Quality control, filtering, normalization, and feature selection for spatial transcriptomics data. Calculate QC metrics, filter spots/cells, normalize counts, and identify highly variable genes. Use when filtering and normalizing spatial transcriptomics data.Votes: 0GitHub stars: 666
- Spatial Statistics Gptomics Bioskills 2Compute spatial statistics for spatial transcriptomics data using Squidpy. Calculate Moran's I, Geary's C, spatial autocorrelation, co-occurrence analysis, and neighborhood enrichment. Use when computing spatial autocorrelation or co-occurrence statistics.Votes: 0GitHub stars: 666
- Spatial Transcriptomics**Version:** 1.0.0 **Author:** MD BABU MIA, PhD **Date:** February 2026Votes: 0GitHub stars: 666
- Spatial Visualization Gptomics Bioskills 2Visualize spatial transcriptomics data using Squidpy and Scanpy. Create tissue plots with gene expression, clusters, and annotations overlaid on histology images. Use when visualizing spatial expression patterns.Votes: 0GitHub stars: 666
- Speech Pathology Ai Erichowens Some Claude Skills 2Expert speech-language pathologist specializing in AI-powered speech therapy, phoneme analysis, articulation visualization, voice disorders, fluency intervention, and assistive communication technology. Activate on 'speech therapy', 'articulation', 'phoneme analysis', 'voice disorder', 'fluency', 'stuttering', 'AAC', 'pronunciation', 'speech recognition', 'mellifluo.us'. NOT for general audio processing, music production, or voice acting coaching without clinical context.Votes: 0GitHub stars: 666
- TessaTESSA (TCR and Expression Joint Clustering) is a Bayesian model that integrates T-cell receptor (TCR) sequence profiling with transcriptomes of T cells. It maps the functional landscape of the TCR repertoire by learning unified representations across modalities. The process employs BriseisEncoder to capture TCR sequence features, creating numerical embeddings that reconstruct Atchley Factor matrices and CDR3 sequences.Votes: 0GitHub stars: 666
- Time Series ForecasterTime series forecasting with ARIMA, Prophet, LSTM, and statistical methods. Activates for "time series", "forecasting", "predict future", "trend analysis", "seasonality", "ARIMA", "Prophet", "sales forecast", "demand prediction", "stock prediction". Handles trend decomposition, seasonality detection, multivariate forecasting, and confidence intervals with SpecWeave increment integration.Votes: 0GitHub stars: 666
- Topexpressinggenesofallcells Pwwang Immunopipe Ceae54d3Identifies and visualizes the top expressing genes per cluster across ALL cells (before T/B cell selection), followed by pathway enrichment analysis. Provides initial overview of all cell populations by highlighting the most highly expressed genes and their biological functions.Votes: 0GitHub stars: 666
- TorbcellselectionSeparates T and non-T cells or B and non-B cells from a mixed cell population. Uses either clonotype percentage from VDJ data, indicator gene expression (CD3 markers for T cells, CD19/CD20 for B cells), custom selector expressions, or k-means clustering for automatic selection.Votes: 0GitHub stars: 666
- TorchaudioAudio signal processing library for PyTorch. Covers feature extraction (spectrograms, mel-scale), waveform manipulation, and GPU-accelerated data augmentation techniques. (torchaudio, melscale, spectrogram, pitchshift, specaugment, waveform, resample)Votes: 0GitHub stars: 666
- Train Model Homericintelligence ProjectodysseyExecute model training with optimization algorithms. Use when running training loops on datasets.Votes: 0GitHub stars: 666
- Unsloth DpoDirect Preference Optimization (DPO) for aligning models with preference data without separate reward models. Triggers: dpo, preference optimization, rlhf, ref_model=none, patchdpotrainer, dpotrainer.Votes: 0GitHub stars: 666
- Using Ai EngineeringRoute AI/ML tasks to correct Yzmir pack - frameworks, training, RL, LLMs, architectures, productionVotes: 0GitHub stars: 666
- Using Dynamic ArchitecturesUse when building networks that grow, prune, or adapt topology during training. Routes to continual learning, gradient isolation, modular composition, and lifecycle orchestration skills.Votes: 0GitHub stars: 666
- Using Neural ArchitecturesThe architecture selection router for CNNs, Transformers, RNNs, GANs, GNNs by data modality and constraintsVotes: 0GitHub stars: 666
- Using Pytorch EngineeringRoutes to appropriate PyTorch specialist skill based on symptoms and problem typeVotes: 0GitHub stars: 666
- Vector DbVector database operations for embeddings and semantic search. Activate for Pinecone, Weaviate, Chroma, pgvector, RAG, and similarity search.Votes: 0GitHub stars: 666
- Vector SearchImplement vector search for knowledge retrieval. Use when adding RAG, semantic search, knowledge base features, or context building for the agent.Votes: 0GitHub stars: 666
- Wandb Plot Rubenbranco Wandb Plot Skill 3Download and generate plots from Weights & Biases runs. Use when you need to: - List projects you have access to - List runs in a W&B project - Inspect available metrics for a run - Download existing plot images from a run - Generate line plots from metric history (loss, accuracy, etc.)Votes: 0GitHub stars: 666
- Wedding Immortalist Erichowens Some Claude Skills 2Transform thousands of wedding photos and hours of footage into an immersive 3D Gaussian Splatting experience with theatre mode replay, face-clustered guest roster, and AI-curated best photos per person. Expert in 3DGS pipelines, face clustering, aesthetic scoring, and adaptive design matching the couple's wedding theme (disco, rustic, modern, LGBTQ+ celebrations). Activate on "wedding photos", "wedding video", "3D wedding", "Gaussian Splatting wedding", "wedding memory", "wedding immortalize...Votes: 0GitHub stars: 666
- 32 Analyze Verify 150 Mykhailodmytriakha My Preacher Helper 3[32] ANALYZE. Ensure every critical claim has verifiable evidence with confidence levels. Each fact must have source + confidence percentage. If confidence <85%, enter Loop150 to find more sources. Use for critical decisions, factual claims, legal/compliance work, or any situation where unverified claims are dangerous.Votes: 0GitHub stars: 666
- 5 Chipseq Qc Bisnake2001 Chromskills 2Performs ChIP-specific biological validation. It calculates metrics unique to protein-binding assays, such as Cross-correlation (NSC/RSC) and FRiP. Use this when you have filtered the BAM file and called peaks for ChIP-seq data. Do NOT use this skill for ATAC-seq data or general alignment statistics.Votes: 0GitHub stars: 666
- Ab Test Setup Aws Educate Template Nextjs SaniWhen the user wants to plan, design, or implement an A/B test or experiment. Also use when the user mentions "A/B test," "split test," "experiment," "test this change," "variant copy," "multivariate test," or "hypothesis." For tracking implementation, see analytics-tracking.Votes: 0GitHub stars: 666
- Ab Test Setup Thecraighewitt Seomachine 2When the user wants to plan, design, or implement an A/B test or experiment. Also use when the user mentions "A/B test," "split test," "experiment," "test this change," "variant copy," "multivariate test," or "hypothesis." For tracking implementation, see analytics-tracking.Votes: 0GitHub stars: 666
- Academic Research Joshuaroll Research Skills 5A tool for rigorous academic research using Semantic Scholar and ArXiv. Focuses on finding highly-cited papers, retrieving abstracts, and following citation trails to understand the provenance of ideas.Votes: 0GitHub stars: 666
- Academic Research Joshuaroll Research SkillsA tool for rigorous academic research using Semantic Scholar and ArXiv. Focuses on finding highly-cited papers, retrieving abstracts, and following citation trails to understand the provenance of ideas.Votes: 0GitHub stars: 666
- Agent Data Researcher Tony363 SuperclaudeExpert data researcher specializing in discovering, collecting, and analyzing diverse data sources. Masters data mining, statistical analysis, and pattern recognition with focus on extracting meaningful insights from complex datasets to support evidence-based decisions.Votes: 0GitHub stars: 666
- Agent Ops Context Map Weholt Script CastAnalyze the codebase to create a concise, LLM-optimized structured overview in .agent/map.md.Votes: 0GitHub stars: 666
- Agent Quant Analyst Tony363 SuperclaudeExpert quantitative analyst specializing in financial modeling, algorithmic trading, and risk analytics. Masters statistical methods, derivatives pricing, and high-frequency trading with focus on mathematical rigor, performance optimization, and profitable strategy development.Votes: 0GitHub stars: 666
- Agent Research Analyst Tony363 SuperclaudeExpert research analyst specializing in comprehensive information gathering, synthesis, and insight generation. Masters research methodologies, data analysis, and report creation with focus on delivering actionable intelligence that drives informed decision-making.Votes: 0GitHub stars: 666
- Aget Analyze DataAnalyze datasets to discover patterns and generate insightsVotes: 0GitHub stars: 666
- Aget Assess RiskAssess risks with likelihood, impact, and mitigation optionsVotes: 0GitHub stars: 666
- Ai News Aggregator Zsutxz Claudelearning获取最新的AI行业新闻，进行智能总结和筛选，最多展示10条最重要的新闻资讯。当用户需要了解AI行业最新动态时使用此skill。Votes: 0GitHub stars: 666
- Aim Best Practices ResearcherResearch current best practices for any technology, pattern, or coding standard. Use when asking about best practices, conventions, coding standards, recommended approaches, or how should I questions. Searches local knowledge first, then web for 2024-2026 sources. Evaluates if findings warrant a reusable skill.Votes: 0GitHub stars: 666
- Algebraic ReasoningSymbolic manipulation, equation solving, and algebraic structures for mathematical reasoning. Covers distributive law, factoring, completing the square, linear through polynomial equation solving, systems of equations (substitution, elimination, Gaussian elimination, matrix methods), algebraic structures (groups, rings, fields), modular arithmetic, polynomial theory, and inequalities. Use when solving equations, simplifying expressions, working with algebraic structures, or performing symboli...Votes: 0GitHub stars: 666
- Alignment Free QuantQuantify transcript expression using pseudo-alignment with Salmon or kallisto. Use when quantifying transcripts with Salmon or kallisto.Votes: 0GitHub stars: 666
- Analysis Swarm D O Hub Rust Self Learning MMulti-persona analytical framework for comprehensive code review and decision-makingVotes: 0GitHub stars: 666
- Analytics Learning Randysalars DreamweavingProcess YouTube analytics to extract actionable insightsVotes: 0GitHub stars: 666
- Analyze Equations Homericintelligence Projectodyssey 2Parse and interpret mathematical equations from research papers. Use when extracting formulas for implementation.Votes: 0GitHub stars: 666
- Analyze Issue Gittower Git Flow Next A94006a1Analyze a GitHub issue and create detailed analysis in workflows/Votes: 0GitHub stars: 666
- Analyzing Deeply Rysweet AzurehaymakerPerforms deep structured analysis on complex or ambiguous problems. Activates when problems are unclear, have multiple perspectives, or require careful thinking before proceeding. Uses ultrathink methodology for systematic exploration of problem space.Votes: 0GitHub stars: 666
- Anomaly Detection Dadbodgeoff DriftRule-based anomaly detection for production systems with configurable thresholds, cooldown periods to prevent alert storms, and error pattern tracking for repeated failures.Votes: 0GitHub stars: 666
- Anthropologist AnalystAnalyzes events through anthropological lens using cultural analysis, ethnographic methods, kinship and social organization, symbolic systems, ritual and practice, and comparative ethnology. Provides insights on cultural meanings, social practices, symbolic structures, cultural change, and cross-cultural patterns. Use when: Cultural conflicts, identity issues, ritual significance, symbolic meanings, cultural change, cross-cultural comparison. Evaluates: Cultural systems, symbolic meanings, so...Votes: 0GitHub stars: 666
- Api Investigator Drillan Note Mcp 2note.com APIの調査を支援します。mitmproxyとPlaywrightを使用してHTTPトラフィックをキャプチャ・分析し、API動作を解明します。Votes: 0GitHub stars: 666
- Argument EvaluationSystematic evaluation of arguments for structure, validity, soundness, and charitable interpretation. Covers premise identification, conclusion extraction, argument mapping, steel-manning, and the distinction between validity (form) and soundness (form plus true premises). Use when assessing an argument, reconstructing an opponent's position fairly, or preparing a rebuttal.Votes: 0GitHub stars: 666