Claude Skills by majiayu000

Guide for implementing Google Gemini API image understanding - analyze images with captioning, classification, visual QA, object detection, segmentation, and multi-image comparison. Use when analyzing images, answering visual questions, detecting objects, or processing documents with vision.

Guide for implementing Google Gemini API image understanding - analyze images with captioning, classification, visual QA, object detection, segmentation, and multi-image comparison. Use when analyzing images, answering visual questions, detecting objects, or processing documents with vision.

Guide for implementing Google Gemini API image understanding - analyze images with captioning, classification, visual QA, object detection, segmentation, and multi-image comparison. Use when analyzing images, answering visual questions, detecting objects, or processing documents with vision.

Gemma Domain Trainer (Prototype)

This skill should be used when working with genomic interval data (BED files) for machine learning tasks. Use for training region embeddings (Region2Vec, BEDspace), single-cell ATAC-seq analysis (scEmbed), building consensus peaks (universes), or any ML-based analysis of genomic regions. Applies to BED file collections, scATAC-seq data, chromatin accessibility datasets, and region-based genomic feature learning.

Problem-solving strategies for gradient methods in optimization

Problem-solving strategies for gradient methods in optimization

Python library for building ML demo UIs with minimal code. Create interactive web interfaces for models with text, image, audio, and video inputs/outputs. Share demos via public links or deploy to Hugging Face Spaces.

Digital pathology image processing toolkit for whole slide images (WSI). Use this skill when working with histopathology slides, processing H&E or IHC stained tissue images, extracting tiles from gigapixel pathology images, detecting tissue regions, segmenting tissue masks, or preparing datasets for computational pathology deep learning pipelines. Applies to WSI formats (SVS, TIFF, NDPI), tile-based analysis, and histological image preprocessing workflows.

Digital pathology image processing toolkit for whole slide images (WSI). Use this skill when working with histopathology slides, processing H&E or IHC stained tissue images, extracting tiles from gigapixel pathology images, detecting tissue regions, segmenting tissue masks, or preparing datasets for computational pathology deep learning pipelines. Applies to WSI formats (SVS, TIFF, NDPI), tile-based analysis, and histological image preprocessing workflows.

Execute Hugging Face Hub operations using the `hf` CLI. Use when the user needs to download models/datasets/spaces, upload files to Hub repositories, create repos, manage local cache, or run comput...

This skill should be used when users want to train or fine-tune language models using TRL (Transformer Reinforcement Learning) on Hugging Face Jobs infrastructure. Covers SFT, DPO, GRPO and reward modeling training methods, plus GGUF conversion for local deployment. Includes guidance on the TRL Jobs package, UV scripts with PEP 723 format, dataset preparation and validation, hardware selection, cost estimation, Trackio monitoring, Hub authentication, and model persistence. Should be invoked f...

Use when the user is doing AI/ML work in a scientific domain — biology, chemistry, physics, astronomy, climate, genomics, materials science, medicine, ecology, energy, conservation, engineering, mathematics, scientific reasoning, drug discovery, protein design, weather modeling, theorem proving, single-cell, PDE solving, or anything similar. Hugging Science (huggingscience.co) is a curated catalog of scientific datasets, models, blog posts, and interactive Spaces; the `hugging-science` org on...

Use Hugging Face Transformers for local model inference, embeddings, and fine-tuning. Covers pipelines, model selection, quantization, and optimization. Use when working with local LLMs, embeddings, or custom model training.

Analyze ML model architecture from papers and code. Use when understanding model structure for implementation.

Debug Gemini/GPT vision API issues in puzzle image extraction

Debug Gemini/GPT vision API issues in puzzle image extraction

Interactive cell type annotation for IMC data. Covers napari-based annotation, marker-guided labeling, training data generation, and annotation validation. Use when manually annotating cell types for training classifiers or validating automated phenotyping results.

K-Scale kinfer model inference engine for deploying trained RL policies to real robots via ONNX Runtime in Rust

Batch effect correction for CRISPR screens. Covers normalization across batches, technical replicate handling, and batch-aware analysis. Use when combining screens from multiple batches or correcting systematic technical variation.

Five-skill sequence for 'what am I missing?' - Collide → Critique → Scale → Synthesize → Simplify. Use when you suspect you're not seeing something.

Business analysis expert who drives project discovery, market research, and requirements validation within the BMAD methodology

Brainstorms ideas and researches projects.

Bibliographic research agent for analyzing books and manuscripts. Builds comprehensive "book biographies" showing production context, textual transmission, related editions, and scholarly networks. Use when asked to research a book's history, find related editions, analyze manuscript transmission, or build bibliographic context.

Stress-test book concepts against existing research before committing to architecture. Use when the user has a Book Concept Document ready for validation, wants to verify their thesis is defensible, needs to understand the competitive intellectual landscape, or wants honest assessment of their idea's strengths and weaknesses. Produces a Validation Report that informs the Go/No-Go decision. Nonfiction only.

Braiins Learn - Bitcoin mining profitability calculators, charts, and data dashboard

Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.

Access BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.

Analyze personal or business expenses from CSV/Excel. Categorize spending, identify trends, compare periods, and get savings recommendations.

Master modern business analysis with AI-powered analytics, real-time dashboards, and data-driven insights. Build comprehensive KPI frameworks, predictive models, and strategic recommendations.

Use when quantitative feasibility checks are needed, order-of-magnitude estimates must be established, or detailed models are required to validate design assumptions and identify rate-limiting steps

Use to score calls, capture highlights, and convert insights into actions.

Summarize customer support/sales calls from [Dialpad](https://composio.dev/toolkits/dialpad) or [Leexi](https://composio.dev/toolkits/leexi) call logs

Maps and documents codebases of any size by orchestrating parallel subagents. Creates docs/CODEBASE_MAP.md with architecture, file purposes, dependencies, and navigation guides. Updates CLAUDE.md with a summary. Use when user says "map this codebase", "cartographer", "/cartographer", "create codebase map", "document the architecture", "understand this codebase", or when onboarding to a new project. Automatically detects if map exists and updates only changed sections.

Analyzes physicochemical properties of CDR3 amino acid sequences to understand biochemical characteristics of T-cell receptor repertoires. Performs regression analysis between two cell groups at different CDR3 lengths for each physicochemical feature (hydrophobicity, volume, isoelectric point, etc.).

Cluster TCR/BCR clones by CDR3 sequences using GIANA or ClusTCR (both Faiss-based). Adds `CDR3_Cluster` column to metadata for clonotype analysis.

複雑な問題を分解し、推論の流れを整理して短い根拠サマリーを作成するスキル。 前提整理、論点分解、選択肢比較、判断理由の要約を通じて、説明責任のあるアウトプットを作る。 Anchors: • The Pragmatic Programmer / 適用: 問題分解 / 目的: 実践的な整理 • Thinking, Fast and Slow / 適用: 判断バイアス確認 / 目的: 判断根拠の明確化 • Critical Thinking / 適用: 論点整理 / 目的: 根拠の一貫性 Trigger: Use when structuring reasoning, summarizing decision rationale, clarifying assumptions, or documenting a step-by-step analysis.

/em -challenge — Pre-Mortem Plan Analysis

Analyzes impact of proposed changes on existing systems (brownfield projects) with delta spec validation. Trigger terms: change impact, impact analysis, brownfield, delta spec, change proposal, change management, existing system analysis, integration impact, breaking changes, dependency analysis, affected components, migration plan, risk assessment, brownfield change. Provides comprehensive change analysis for existing systems: - Affected component identification - Breaking change detection...

Implement AI chatbot analytics and conversation monitoring. Use when adding conversation metrics, tracking AI usage, measuring user engagement with chat, or building conversation dashboards.

要件の衝突を検出

Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.

Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.

Query ChEMBL's bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.

Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.

Comprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.

用于梳理和可视化代码流程，生成清晰的 ASCII 流程图、数据流图和表格分析。适用于已有代码的梳理、新功能设计的说明、以及技术文档的编写。

Efficient codebase investigation for rapid-go. Use when understanding existing code before modifications, tracing request flows from API to database, finding where functionality is implemented, or analyzing impact before changes. ALWAYS use before modifying existing code, fixing bugs, or adding features.

Produce a structured codebase analysis report with architecture overview, critical files, patterns, and actionable recommendations. Use when asked to "analyze codebase", "explore codebase", "understand this codebase", "map the codebase", "give me an overview of this project", "what does this codebase do", "codebase report", "project analysis", "audit this codebase", or "how is this project structured".

Produce a structured codebase analysis report with architecture overview, critical files, patterns, and actionable recommendations. Use when asked to "analyze codebase", "explore codebase", "understand this codebase", "map the codebase", "give me an overview of this project", "what does this codebase do", "codebase report", "project analysis", "audit this codebase", or "how is this project structured".