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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Structural Clustering Validation In Chemical SpaceUse when you have trained or loaded a deep learning model that producesVotes: 0GitHub stars: 16
- Structural Identifier Completeness CheckingUse when preprocessing open mass spectrometry libraries (OMSLs) or aggregatedVotes: 0GitHub stars: 16
- Structural Scaffold Feature IdentificationUse when you have 2D NMR spectral data (HSQC, HMBC, COSY) from multipleVotes: 0GitHub stars: 16
- Structural Similarity Ground Truth ValidationUse when you have a spectral library with structural ground truth (InChIKeyVotes: 0GitHub stars: 16
- Structural Similarity Scoring MetabolitesUse when when you have paired MS/MS spectra from unknown metabolitesVotes: 0GitHub stars: 16
- Structural Similarity ScoringUse when when you have a collection of mass spectra with annotated chemicalVotes: 0GitHub stars: 16
- Structure Annotation Via Similarity RankingUse when you have an unknown tandem MS spectrum and seek to assign aVotes: 0GitHub stars: 16
- Structure Database Candidate RetrievalUse when you have a mass spectrum of an unknown metabolite with a knownVotes: 0GitHub stars: 16
- Structure Prediction From Mass SpectraUse when you have GNPS-style MGF spectral files from MS/MS experimentsVotes: 0GitHub stars: 16
- Structure Prediction From SpectraUse when you have experimental mass spectrometry spectra (LC–QTOF orVotes: 0GitHub stars: 16
- Structure Ranking From Spectral DataUse when you have an experimental tandem mass spectrum (collision-inducedVotes: 0GitHub stars: 16
- Structure Selection FilteringUse when when you have an unknown metabolite's predicted structural similarityVotes: 0GitHub stars: 16
- Structure Similarity ComparisonUse when after executing a molecular structure prediction model on spectroscopicVotes: 0GitHub stars: 16
- Structure Similarity EvaluationUse when after an NMR-based structure prediction model has generatedVotes: 0GitHub stars: 16
- Structured Data Compilation From ReadmeUse when when a scientific software repository documents multiple standaloneVotes: 0GitHub stars: 16
- Structured Data Element CheckingUse when you have generated or received a mass spectrometry data fileVotes: 0GitHub stars: 16
- Structured Data SerializationUse when when you have mwTab-formatted Mass Spectrometry or Nuclear MagneticVotes: 0GitHub stars: 16
- Structured Data Table CreationUse when you have obtained a raw reference library file (such as theVotes: 0GitHub stars: 16
- Structured Molecule Relationship EvaluationUse when when you have tandem mass spectra (MSMS) from related or candidateVotes: 0GitHub stars: 16
- Structured Report GenerationUse when after applying jsonschema validation to a parsed mwTab fileVotes: 0GitHub stars: 16
- Subformula Assignment Neural NetworksUse when when you have MS/MS spectra with assigned precursor formulasVotes: 0GitHub stars: 16
- Subformula Enumeration And Mass Calculation'Use when when performing chemical denoising of MS/MS spectra: afterVotes: 0GitHub stars: 16
- Subformula EnumerationUse when when performing chemical noise removal on MS/MS spectra andVotes: 0GitHub stars: 16
- Substrate Concentration NormalizationUse when you have LC-MS normalized intracellular metabolite abundanceVotes: 0GitHub stars: 16
- Substructural Motif AnnotationUse when you have created a GNPS molecular network (classical or feature-basedVotes: 0GitHub stars: 16
- Substructure Annotation IntegrationUse when you have (1) a GNPS molecular network (classical or feature-based)Votes: 0GitHub stars: 16
- Summarized Experiment Object ConstructionUse when when you have imported a tab-delimited metabolomics file (viaVotes: 0GitHub stars: 16
- Summarized Experiment Object HandlingUse when you have cross-validated, filtered metabolomic NMR or MS dataVotes: 0GitHub stars: 16
- Summarized Experiment SubsettingUse when when you have a SummarizedExperiment containing metabolomicVotes: 0GitHub stars: 16
- Summary Statistics Table ConstructionUse when when you need to quantify and compare the effect of multipleVotes: 0GitHub stars: 16
- Summary Visualization Artifact GenerationUse when you have completed batch spectral searches against multipleVotes: 0GitHub stars: 16
- Survival Data PreparationUse when when you have clinical survival outcomes (event status and follow-upVotes: 0GitHub stars: 16
- Suspect Database MatchingUse when you have LC-MS peak/feature data, a curated suspect compoundVotes: 0GitHub stars: 16
- Swath Ms Spectrum DeconvolutionUse when you have SWATH-MS raw data (mzML or vendor format) from an untargetedVotes: 0GitHub stars: 16
- Syntax Tree Construction ParsingUse when you have a domain-specific language (DSL) grammar specificationVotes: 0GitHub stars: 16
- Synthetic Lcmsms Data GenerationUse when you need to create defined LC-MS/MS datasets with known molecularVotes: 0GitHub stars: 16
- Synthetic Spectrum GenerationUse when when you need to create benchmark LC-MS/MS datasets with controlled,Votes: 0GitHub stars: 16
- Synthetic Training Instance GenerationUse when when you have a small set of matched reference features (isolated,Votes: 0GitHub stars: 16
- System Call Invocation Via System2Use when you need to query or extract data from Thermo Fisher ScientificVotes: 0GitHub stars: 16
- System Environment ConfigurationUse when you need to execute a complex computational chemistry workflowVotes: 0GitHub stars: 16
- System Path Environment Configuration'Use when when setting up imzML Writer for the first time on a new machine,Votes: 0GitHub stars: 16
- Systematic Mass Calibration And Drift CorrectionUse when when processing multiple LC-MS samples in a cohort study andVotes: 0GitHub stars: 16
- Tab Delimited Metabolomics File ParsingUse when when you have raw metabolomics measurements in tab-delimitedVotes: 0GitHub stars: 16
- Table Join Alignment On IdentifiersUse when you have a feature quantification table output from MZmine3Votes: 0GitHub stars: 16
- Tabular Data CleaningUse when you have a CSV or table-format spectral peak list (with chemicalVotes: 0GitHub stars: 16
- Tabular Data ExportUse when you have extracted MS1 or MS2 peak lists and scan headers fromVotes: 0GitHub stars: 16
- Tabular Data Field ComparisonUse when you have multiple independent implementations of the same dataVotes: 0GitHub stars: 16
- Tabular Data Io And MaskingUse when after generating a preliminary feature table from LC-MS dataVotes: 0GitHub stars: 16
- Tabular Data Parsing And Structure ConversionUse when you have a txt or tabular export file from a liquid chromatography–massVotes: 0GitHub stars: 16
- Tabular Data StandardizationUse when when you have received raw MRM lipidomics export files in vendor-specificVotes: 0GitHub stars: 16