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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Spectral Baseline CorrectionUse when you have loaded raw MSI spectral data (imzML format) in profileVotes: 0GitHub stars: 16
- Spectral Batch Submission To Networking ServerUse when you have deconvolved GC-MS spectra in GNPS_GC input-compatibleVotes: 0GitHub stars: 16
- Spectral Bucket AssignmentUse when you have a collection of mass spectrometry spectral data (m/zVotes: 0GitHub stars: 16
- Spectral Candidate ClassificationUse when after performing spectral library matching of mass spectrometryVotes: 0GitHub stars: 16
- Spectral Cluster Connectivity AssessmentUse when after running spectral networking on tandem MS data and obtainingVotes: 0GitHub stars: 16
- Spectral Clustering And Feature GroupingUse when you have raw MS/MS feature data with m/z, retention time, andVotes: 0GitHub stars: 16
- Spectral Clustering Density BasedUse when you have computed a sparse pairwise distance matrix from MS/MSVotes: 0GitHub stars: 16
- Spectral Connectivity FilteringUse when you have picked peaks (coordinates and intensities) from anVotes: 0GitHub stars: 16
- Spectral Consensus Spectrum GenerationUse when after extracting and filtering top-TIC spectra for a given featureVotes: 0GitHub stars: 16
- Spectral Corpus RepresentationUse when you have a collection of tandem mass spectrometry spectra inVotes: 0GitHub stars: 16
- Spectral Correlation InterpretationUse when you have preprocessed 1H NMR spectral data (e.g., from plasmaVotes: 0GitHub stars: 16
- Spectral Coverage And Intensity Metric ComputationUse when you have completed a ViMMS simulation run or processed realVotes: 0GitHub stars: 16
- Spectral Data AlignmentUse when you have quantification tables (with feature IDs and abundanceVotes: 0GitHub stars: 16
- Spectral Data Compression By Frame And MobilityUse when you have raw IM-MS data in Agilent MassHunter (.d) or UIMF formatVotes: 0GitHub stars: 16
- Spectral Data ExplorationUse when you have completed msFeaST pipeline preprocessing and generatedVotes: 0GitHub stars: 16
- Spectral Data Export And Format ConversionUse when after running RAMClustR clustering on XCMS-processed metabolomicsVotes: 0GitHub stars: 16
- Spectral Data FilteringUse when you have loaded a full set of MS scans (e.g., all MS1 scansVotes: 0GitHub stars: 16
- Spectral Data Format ConversionUse when you have raw tandem mass spectrometry data in one or more ofVotes: 0GitHub stars: 16
- Spectral Data Format Parsing Nmr Hsqc Cosy IrUse when when you have downloaded raw spectral datasets from multipleVotes: 0GitHub stars: 16
- Spectral Data Format ParsingUse when when you have raw LC-MS/MS data files in mzML, mzXML, or vendor-specificVotes: 0GitHub stars: 16
- Spectral Data Format ValidationUse when after converting existing mass spectrometry formats (mzML, vendorVotes: 0GitHub stars: 16
- Spectral Data Import And ParsingUse when you have raw mass spectrometry data in one or more supportedVotes: 0GitHub stars: 16
- Spectral Data Import ValidationUse when when you have raw mass spectrometry data in one or more of theVotes: 0GitHub stars: 16
- Spectral Data Input Handling Mgf FormatUse when when you have raw MS/MS mass spectrometry data and need to submitVotes: 0GitHub stars: 16
- Spectral Data IntegrationUse when you have three distinct mass spectrometry data sources (quantificationVotes: 0GitHub stars: 16
- Spectral Data Integrity CheckingUse when after converting mass-spectrometry data from an existing formatVotes: 0GitHub stars: 16
- Spectral Data Loading From RepositoryUse when when you need to retrieve a specific MS/MS spectrum from a publicVotes: 0GitHub stars: 16
- Spectral Data Normalization And MergingUse when you have acquired multiple MS1 spectra over a defined acquisitionVotes: 0GitHub stars: 16
- Spectral Data Normalization TicUse when apply TIC normalization when you have raw, unprocessed massVotes: 0GitHub stars: 16
- Spectral Data Object Construction And IntegrationUse when you have centroided mzML files from LC–MS experiments and needVotes: 0GitHub stars: 16
- Spectral Data Object ConstructionUse when you have a set of centroided .mzML LC-MS files from a targetedVotes: 0GitHub stars: 16
- Spectral Data Preprocessing LipidomicsUse when you have raw lipidomic and metabolomic spectral data files fromVotes: 0GitHub stars: 16
- Spectral Data Preprocessing NormalizationUse when you have raw MS/MS spectral data in MGF format from multipleVotes: 0GitHub stars: 16
- Spectral Data PreprocessingUse when you have raw or processed MS spectrum data (mz/intensity pairs)Votes: 0GitHub stars: 16
- Spectral Data Processing And AnnotationUse when when you have raw LC-MS/MS DDA spectral data (positive and/orVotes: 0GitHub stars: 16
- Spectral Data Quality AssessmentUse when importing raw or public mass spectrometry spectral data in formatsVotes: 0GitHub stars: 16
- Spectral Data Quality AssuranceUse when when importing raw mass spectrometry data in formats like mzML,Votes: 0GitHub stars: 16
- Spectral Data RetrievalUse when you have a USI string (e.g., mzspec:GNPS:TASK-d93bdbb5cdda40e48975e6e18a45c3ce-f.mwang87/data/...Votes: 0GitHub stars: 16
- Spectral Data SerializationUse when after completing MS/MS spectra detection and peak recognitionVotes: 0GitHub stars: 16
- Spectral Data StandardizationUse when you have completed a GNPS1 (METABOLOMICS-SNETS, METABOLOMICS-SNETS-V2,Votes: 0GitHub stars: 16
- Spectral Data Table ConversionUse when when you have mzPeak format spectrum files and need to workVotes: 0GitHub stars: 16
- Spectral Data ValidationUse when when raw spectra have been imported from common MS/MS file formatsVotes: 0GitHub stars: 16
- Spectral Data VisualizationUse when you have executed MassQL queries on mzML mass spectrometry dataVotes: 0GitHub stars: 16
- Spectral Database CompilationUse when you have generated predicted fragment spectra for a set of compoundsVotes: 0GitHub stars: 16
- Spectral Database Integration And SamplingUse when you need to generate synthetic LC/GC-MS feature tables or rawVotes: 0GitHub stars: 16
- Spectral Database MatchingUse when when you have MS2 .mzML format data files from untargeted metabolomicsVotes: 0GitHub stars: 16
- Spectral Database Output NormalizationUse when you have executed batch spectral searches against two or moreVotes: 0GitHub stars: 16
- Spectral Database Query ExecutionUse when when you have an unknown mass spectrum (query spectrum) andVotes: 0GitHub stars: 16
- Spectral Database Schema ValidationUse when when you have compiled raw mass spectrometry transition dataVotes: 0GitHub stars: 16
- Spectral Database Search And ScoringUse when you have preprocessed mass spectrometry data (peak-picked, baseline-corrected)Votes: 0GitHub stars: 16