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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Notebook Execution And ReproducibilityUse when when you have access to a peer-reviewed manuscript with an accompanyingVotes: 0GitHub stars: 16
- Notification Configuration ManagementUse when setting up a Rapid QC-MS monitoring job and you need to defineVotes: 0GitHub stars: 16
- Notification Payload FormattingUse when when a QC check fails during an LC-MS instrument run and youVotes: 0GitHub stars: 16
- Nps Classification PredictionUse when you have an unknown mass spectrum from a suspicious analyteVotes: 0GitHub stars: 16
- Nucleoside Fragmentation Model SelectionUse when when your input biomolecule is a nucleoside or modified nucleosideVotes: 0GitHub stars: 16
- Numeric Array Round Trip ValidationUse when after implementing or modifying a numerical compression codecVotes: 0GitHub stars: 16
- Numeric List Construction ValidationUse when implementing a backendInitialize() method for a custom MsBackendVotes: 0GitHub stars: 16
- Numeric List Slot ManagementUse when when extending the MsBackend virtual class to create a customVotes: 0GitHub stars: 16
- Numeric Variable Range AnalysisUse when you have loaded a numeric column (e.g., H/C ratio, O/C ratio,Votes: 0GitHub stars: 16
- Numerical Equivalence TestingUse when you need to confirm that omitting an optional input parameterVotes: 0GitHub stars: 16
- Numerical Equivalence VerificationUse when when you have reimplemented an algorithm in a new package orVotes: 0GitHub stars: 16
- Numerical Method Scheme AnalysisUse when when correcting LC-MS isotope labeling data and existing numericalVotes: 0GitHub stars: 16
- Numpress Compression Algorithm EncodingUse when you have raw floating-point m/z and intensity arrays extractedVotes: 0GitHub stars: 16
- Numpy Array ManipulationUse when when you have raw MS/MS peak lists that need to be loaded, analyzedVotes: 0GitHub stars: 16
- Nv Header Structure InterpretationUse when you have a raw NV file from NMRViewJ or compatible NMR acquisitionVotes: 0GitHub stars: 16
- Object Detection Model TrainingUse when you have annotated LC-MS ROI snippets with ground-truth peak/non-peakVotes: 0GitHub stars: 16
- Object Oriented Class Hierarchy DesignUse when when you need to create a plotting or visualization frameworkVotes: 0GitHub stars: 16
- Object State Mutation DetectionUse when when calling filter functions (e.g., filter_mispicked_ions(),Votes: 0GitHub stars: 16
- Ondiskmsnexp Object Manipulation And ExportUse when you have raw CE-MS data and need to (1) transform migrationVotes: 0GitHub stars: 16
- One Hot Encoding Categorical Chromatography FeaturesUse when you have raw HPLC column metadata containing categorical fieldsVotes: 0GitHub stars: 16
- Online Proteomics Resource IntegrationUse when your analysis requires MS/MS spectra from public proteomicsVotes: 0GitHub stars: 16
- Open Format Mass Spectrometry File HandlingUse when you have raw mass spectrometry data in vendor-proprietary formatsVotes: 0GitHub stars: 16
- Open Modification Mass Shift DetectionUse when query mass spectra do not confidently match unmodified peptidesVotes: 0GitHub stars: 16
- Open Modification Peptide IdentificationUse when when you have high-resolution tandem mass spectra (query spectra)Votes: 0GitHub stars: 16
- Open Modification SearchUse when your query spectra contain peptides with unknown modificationsVotes: 0GitHub stars: 16
- Open Modification Spectral Search StrategyUse when when searching an unknown query MS/MS spectrum against a largeVotes: 0GitHub stars: 16
- Open Modification Spectrum MatchingUse when when you have a query mass spectrum with unknown or unanticipatedVotes: 0GitHub stars: 16
- Open Source Mass Spectrometry File Format InteroperabilityUse when when working with Bruker .d/.baf mass spectrometry imaging dataVotes: 0GitHub stars: 16
- Openms Api Surface ExposureUse when when you need to make OpenMS C++ classes, functions, or dataVotes: 0GitHub stars: 16
- Optimal Transport ScoringUse when when you have an observed NMR mixture spectrum and one or moreVotes: 0GitHub stars: 16
- Oracle Mode Structural Constraint IntegrationUse when when you have loaded both a known compound and its modifiedVotes: 0GitHub stars: 16
- Orbitrap Spectrum Acquisition InterpretationUse when when you have a Thermo Scientific .raw file from an OrbitrapVotes: 0GitHub stars: 16
- Orbitrap Spectrum Extraction From Raw FilesUse when you have a Thermo Fisher Orbitrap .raw file and need to retrieveVotes: 0GitHub stars: 16
- Orchestrator Architecture DesignUse when when building a multi-backend visualization library where usersVotes: 0GitHub stars: 16
- Order Agnostic Dispatch RoutingUse when when your untargeted LC-MS pipeline must support multiple peak-pickingVotes: 0GitHub stars: 16
- Organism Metadata RetrievalUse when when a project JSON document contains genome identifiers butVotes: 0GitHub stars: 16
- Organism Specific Metabolism Pathway AssignmentUse when you have observed metabolites (from LC-MS/MS, chromatography,Votes: 0GitHub stars: 16
- Orthogonal Projection DeconvolutionUse when you have overlapped peak regions in GC-MS chromatography dataVotes: 0GitHub stars: 16
- Outlier Detection And Downweighting In RegressionUse when when fitting a nonlinear regression (GAM spline) through retentionVotes: 0GitHub stars: 16
- Outlier Detection Qc Sample Ratio AnalysisUse when after building a SummarizedExperiment object from metabolomicsVotes: 0GitHub stars: 16
- Outlier Feature ClassificationUse when after peak picking by MS-DIAL and import into R, when the featureVotes: 0GitHub stars: 16
- Overfitting Detection And PreventionUse when when training a fresh CNN model from scratch on labeled LCMSVotes: 0GitHub stars: 16
- Overlapped Peak Deconvolution ValidationUse when after solving for the concentration distribution matrix C usingVotes: 0GitHub stars: 16
- Overlapped Peak Resolution TransformerUse when when GC-MS chromatograms contain overlapped or co-eluting peaksVotes: 0GitHub stars: 16
- Overlapped Peak Separation EvaluationUse when you have trained a GCMSFormer Transformer model on augmentedVotes: 0GitHub stars: 16
- Overlapping Ion DetectionUse when when annotating matrix-related ions in MSI datasets where twoVotes: 0GitHub stars: 16
- Overlapping Peak Detection InterpretationUse when annotating matrix-related signals in MSI datasets where chemicalVotes: 0GitHub stars: 16
- Package Installation Verification And TestingUse when a Python package has been relocated to a new repository location,Votes: 0GitHub stars: 16
- Package Integration TestingUse when you need to verify that a Python package (or similar installableVotes: 0GitHub stars: 16
- Package Metadata CompilationUse when when a package README or publication claims to install a large,Votes: 0GitHub stars: 16