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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Multi Sample Cohort AssessmentUse when when you have MS1 mass spectrometry data from multiple samplesVotes: 0GitHub stars: 16
- Multi Sample Metabolomics Data IntegrationUse when you have two or more independently processed MemoMatrix objectsVotes: 0GitHub stars: 16
- Multi Score Complementarity EvaluationUse when you have two or more independent scoring functions ranking theVotes: 0GitHub stars: 16
- Multi Source Spectrum RetrievalUse when when you have a Universal Spectrum Identifier (USI) string orVotes: 0GitHub stars: 16
- Multi Species Lipid PredictionUse when you have candidate lipid annotations from high-throughput spectralVotes: 0GitHub stars: 16
- Multi Task Attention Mechanism IntegrationUse when when baseline MLP or GNN models for spectral prediction showVotes: 0GitHub stars: 16
- Multi Task Auxiliary Target GenerationUse when training neural network models (MLP or GNN) for metabolite annotationVotes: 0GitHub stars: 16
- Multi Task Learning Feature FusionUse when when you have multi-branch deep learning architecture predictingVotes: 0GitHub stars: 16
- Multi Task Loss Function FormulationUse when when training an object detection network that must predictVotes: 0GitHub stars: 16
- Multi Tool Results ComparisonUse when you have feature identification outputs from two or more DIA-MSVotes: 0GitHub stars: 16
- Multi Tool Schema MappingUse when you have peak/feature table outputs from one or more peak-pickingVotes: 0GitHub stars: 16
- Multi Tool Spectral Compatibility EncodingUse when after RAMClustR clustering and do.findmain molecular weightVotes: 0GitHub stars: 16
- Multi Window Mass Range Parameter OptimizationUse when you observe sawtooth or discontinuous peak profiles in EICsVotes: 0GitHub stars: 16
- Multiblock Pls Model FittingUse when you have split multi-assay LC-MS intensity data into trainingVotes: 0GitHub stars: 16
- Multiclass Metabolite ComparisonUse when when you have a normalized metabolite abundance matrix withVotes: 0GitHub stars: 16
- Multidimensional Coordinate AlignmentUse when you have detected feature tables from two or more LC-IMS-MS/MSVotes: 0GitHub stars: 16
- Multidimensional Feature AnnotationUse when you have a peak-picked feature table (HDF5 format) from high-dimensionalVotes: 0GitHub stars: 16
- Multidimensional Feature Detection And AlignmentUse when when you have acquired LC-IMS-MS/MS data (mzML or mzML.gz format)Votes: 0GitHub stars: 16
- Multidimensional Feature Extraction From SpectraUse when you have preprocessed MS/MS spectral data (normalized peak intensitiesVotes: 0GitHub stars: 16
- Multidimensional Ms Data Conversion'Use when you have acquired untargeted MS data with orthogonal separationsVotes: 0GitHub stars: 16
- Multidimensional Scaling EmbeddingUse when after computing a pairwise sample distance matrix from alignedVotes: 0GitHub stars: 16
- Multidimensional Signal Smoothing ImmsUse when processing raw IM-MS data (Agilent MassHunter .d or UIMF format)Votes: 0GitHub stars: 16
- Multidimensional Spectral Array ExtractionUse when you have multidimensional MS data (with LC and/or ion mobilityVotes: 0GitHub stars: 16
- Multiformat Data Export To Pdf CsvUse when you have raw MS data in vendor formats (Agilent .d, Thermo .raw,Votes: 0GitHub stars: 16
- Multimodal Spectral Alignment By Molecular IdentifierUse when you have parsed spectral data from four distinct modalitiesVotes: 0GitHub stars: 16
- Multimodal Spot Correspondence MappingUse when when you have paired spatial transcriptome and metabolome datasetsVotes: 0GitHub stars: 16
- Multimodal Tensor Construction And ValidationUse when when you have downloaded raw spectroscopic datasets from multipleVotes: 0GitHub stars: 16
- Multiple Linear Regression Model ApplicationUse when when you have an observed m/z value from mass spectrometry imagingVotes: 0GitHub stars: 16
- Multiple Testing Correction BonferroniUse when when you have computed raw p-values for multiple independentVotes: 0GitHub stars: 16
- Multiple Testing Correction MetabolomicsUse when you have computed raw p-values from partial Spearman correlationsVotes: 0GitHub stars: 16
- Multiplexed Spectra Recovery And DeconvolutionUse when you have raw IM-MS data in UIMF or Agilent MassHunter .d formatVotes: 0GitHub stars: 16
- Multiplexed Spectrum DecompositionUse when you have SWATH-MS data (mzML or vendor binary format) whereVotes: 0GitHub stars: 16
- Multistage Neural Architecture Training'Use when you have paired mass spectra and molecular structure datasetsVotes: 0GitHub stars: 16
- Multitask Model InferenceUse when you have a trained multitask model checkpoint and preprocessedVotes: 0GitHub stars: 16
- Multivariate Feature Importance Extraction'Use when you have a preprocessed peak table (feature matrix: samplesVotes: 0GitHub stars: 16
- Multivariate Lipid Metabolite AnalysisUse when you have integrated, normalized lipidomic and metabolomic featureVotes: 0GitHub stars: 16
- Multivariate Ordination InterpretationUse when you have a collection of tandem MS/MS samples (stored in MassIVE)Votes: 0GitHub stars: 16
- Multivariate Statistical Analysis MetabolomicsUse when when you have preprocessed non-targeted LC-MS/MS feature tablesVotes: 0GitHub stars: 16
- Multivariate Statistical Quality ControlUse when after data normalization (Step 7) when you have a preprocessedVotes: 0GitHub stars: 16
- Multiway Principal Component Analysis Score ExtractionUse when after preprocessing and aligning 2D chromatogram data (baselineVotes: 0GitHub stars: 16
- Mwtab To Json ConversionUse when you have mwTab-formatted files from the Metabolomics WorkbenchVotes: 0GitHub stars: 16
- Mz Binning And IndexingUse when immediately after parsing mzML files into (m/z, scan_number,Votes: 0GitHub stars: 16
- Mz Decimal ExtractionUse when after loading a feature table with m/z values from MS-Dial outputVotes: 0GitHub stars: 16
- Mz Retention Time Tolerance Parameter ConfigurationUse when when invoking Asari to process centroid mzML files for the firstVotes: 0GitHub stars: 16
- Mzmine Batch Processing ConfigurationUse when you have raw metabolomics data in mzML or mzXML format and needVotes: 0GitHub stars: 16
- Mzmine Quantitative Table ParsingUse when you have LC–MS/MS data processed through MZmine2 or MZmine3Votes: 0GitHub stars: 16
- Mzml Data Access AbstractionUse when when building or extending a mass spectrometry data parser thatVotes: 0GitHub stars: 16
- Mzml Data Parsing Pymzml PyopenmsUse when you have mzML-format mass spectrometry data files and need toVotes: 0GitHub stars: 16
- Mzml Feature Table ParsingUse when you have raw LCMS data in mzML format and a feature table (CSV)Votes: 0GitHub stars: 16
- Mzml File Format GenerationUse when when you need to generate reproducible synthetic LC/GC-MS rawVotes: 0GitHub stars: 16