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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Hplc Column Parameter NormalizationUse when when you have raw HPLC column specifications from RepoRT orVotes: 0GitHub stars: 16
- Hrms Data Format ParsingUse when you have raw or processed HRMS/MS data from Q-Exactive, AgilentVotes: 0GitHub stars: 16
- Hrms Feature Annotation IntegrationUse when you have LC- or GC-HRMS data in mzML format and a feature listVotes: 0GitHub stars: 16
- Html Bundle Rendering In BrowserUse when you have a dashboard_data.json file (JSON export from the msFeaSTVotes: 0GitHub stars: 16
- Http Api Endpoint DesignUse when when you need to expose a multi-step spectral processing workflowVotes: 0GitHub stars: 16
- Http Api Integration With External ServicesUse when when your application needs to enrich or predict spectral propertiesVotes: 0GitHub stars: 16
- Http File Upload ImplementationUse when you are building the initial data ingestion step of a high-throughputVotes: 0GitHub stars: 16
- Http Post Request AssemblyUse when you have NMR peak data (1H and 13C chemical shift values) thatVotes: 0GitHub stars: 16
- Hybrid Model Fusion StrategyUse when you have 1H NMR spectral data from complex mixtures and needVotes: 0GitHub stars: 16
- Hydrogen Rearrangement Rules ScoringUse when after MS-CleanR has filtered and clustered LC-MS features andVotes: 0GitHub stars: 16
- Hyperdimensional Computing ProjectionUse when when clustering large-scale mass spectrometry datasets (millionsVotes: 0GitHub stars: 16
- Hyperdimensional Vector EncodingUse when you have preprocessed mass spectra (mz/intensity pairs in MGFVotes: 0GitHub stars: 16
- Hyperparameter Sweep ConfigurationUse when when implementing multiple competing model architectures (e.Votes: 0GitHub stars: 16
- Hyperparameter Tuning Learning Rate Optimizer SelectionUse when when training a fresh NeatMS CNN model from scratch on LCMSVotes: 0GitHub stars: 16
- Identifier Format Parsing And ValidationUse when you receive mass spectrometry data through heterogeneous identifierVotes: 0GitHub stars: 16
- Identity Search Spectrum AnnotationUse when you have experimental MS/MS spectra and need to assign definitiveVotes: 0GitHub stars: 16
- Igzip Compression And Indexed Block FormatUse when you have mzML mass spectrometry files that need both compressionVotes: 0GitHub stars: 16
- Igzip Header Structure EncodingUse when when implementing an igzip parser, decoder, or validator thatVotes: 0GitHub stars: 16
- Im Ms Drift Time CorrectionUse when when you have IM-MS lipidomics data acquired on samples spikedVotes: 0GitHub stars: 16
- Image Based Feature Extraction Ms MapsUse when you have a two-dimensional MS map (m/z vs retention time) fromVotes: 0GitHub stars: 16
- Image Intensity JitteringUse when when preparing ion images (single-channel 2D arrays or multi-channelVotes: 0GitHub stars: 16
- Image Processing For MetabolomicsUse when you have GC–MS or LC–MS data represented as a two-dimensionalVotes: 0GitHub stars: 16
- Image Processing On Two Dimensional Mass Spectrometry MapsUse when when you have raw GC–MS data in two-dimensional m/z × retentionVotes: 0GitHub stars: 16
- Image Visualization FormattingUse when you have loaded a normalized or raw pixel array (NumPy format)Votes: 0GitHub stars: 16
- Imaging Data Workspace IntegrationUse when you have paired cdf files (raw mass spectrometry imaging data)Votes: 0GitHub stars: 16
- Imaging Mass Spectrometry CharacterizationUse when you have raw mass spectrometry data files (mzML, NetCDF, orVotes: 0GitHub stars: 16
- Imaging Mass Spectrometry Ion IdentificationUse when you have imaging mass spectrometry data from spatial metabolomicsVotes: 0GitHub stars: 16
- Imaging Parameter Metadata AnnotationUse when after mzML-to-imzML conversion has produced barebones imzMLVotes: 0GitHub stars: 16
- Imms Data Format ConversionUse when when you have raw Agilent MassHunter (.d) or UIMF IM-MS dataVotes: 0GitHub stars: 16
- Imputation Algorithm SelectionUse when you have a metabolomics dataset with left-censored missing valuesVotes: 0GitHub stars: 16
- Imzml Continuous Format ParsingUse when you have acquired raw mass spectrometry imaging data in imzMLVotes: 0GitHub stars: 16
- Imzml File Format ParsingUse when you have acquired imaging mass spectrometry (IMS) data storedVotes: 0GitHub stars: 16
- Imzml File Loading And ImportUse when when you have one or more imzML files containing mass spectrometryVotes: 0GitHub stars: 16
- Imzml Metadata ParsingUse when you have received paired .imzML (XML metadata) and .ibd (binaryVotes: 0GitHub stars: 16
- In Memory Optimization For Large DatasetsUse when you are repeatedly querying or iterating over multidimensionalVotes: 0GitHub stars: 16
- In Silico Compound AnnotationUse when after feature filtering and clustering have been completed inVotes: 0GitHub stars: 16
- In Silico Fragment M Z CalculationUse when when you have experimental UHPLC-HRMS/MS or direct infusionVotes: 0GitHub stars: 16
- In Silico Fragment PredictionUse when you have a collection of compound structures in SDF format (e.g.,Votes: 0GitHub stars: 16
- In Silico Fragmentation PredictionUse when you have candidate metabolite structures (from database lookupVotes: 0GitHub stars: 16
- In Silico Fragmentation Simulation ValidationUse when you have experimental peak lists (m/z, retention time, intensity)Votes: 0GitHub stars: 16
- In Silico Spectrum Generation CfmidUse when when you have a list of SMILES strings representing chemicalVotes: 0GitHub stars: 16
- In Silico Spectrum Metadata CurationUse when when processing collections of in-silico mass spectra from OMSLsVotes: 0GitHub stars: 16
- In Source Fragment Adduct Candidate FlaggingUse when you have aligned, imputed time-resolved mass spectrometric dataVotes: 0GitHub stars: 16
- In Source Fragment IdentificationUse when you have an LCMS feature table (from XCMS, MS-DIAL, MZmine2,Votes: 0GitHub stars: 16
- Inadequate Spectral InterpretationUse when you have clustered peak networks from INADEQUATE NMR spectraVotes: 0GitHub stars: 16
- Inadequate Spectral ProcessingUse when you have raw INADEQUATE NMR spectrum files (e.g., in standardVotes: 0GitHub stars: 16
- Inchikey Extraction From Spectral LibraryUse when you have a GNPS DBResult file from spectral library matchingVotes: 0GitHub stars: 16
- Inchikey Identifier NormalizationUse when gNPS has stopped supplying ClassyFire ontology information forVotes: 0GitHub stars: 16
- Inchikey Normalization And DeduplicationUse when you have an annotated MS/MS spectral dataset with structureVotes: 0GitHub stars: 16
- Inchikey Smiles StandardizationUse when when you have raw MS/MS spectra from repositories like GNPSVotes: 0GitHub stars: 16