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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Full Scan Acquisition StrategyUse when you need to assess MS1-level ionization efficiency, peak detectionVotes: 0GitHub stars: 16
- Function Wrapping And Binding MechanismsUse when when you have Spectra objects in R and need to apply PythonVotes: 0GitHub stars: 16
- Functional Module Inference From NetworksUse when you have an untargeted metabolomics feature table (m/z and retentionVotes: 0GitHub stars: 16
- Functional Trait Diversity AnalysisUse when when you have abundance-normalized FT-ICR MS peak data withVotes: 0GitHub stars: 16
- Fusion Pooling Strategy ImplementationUse when you have extracted parallel feature streams from a CNN backboneVotes: 0GitHub stars: 16
- Fuzzy Analog Search FragmentationUse when when you have experimental MS/MS spectra and want to discoverVotes: 0GitHub stars: 16
- Galaxy Installation ConfigurationUse when you have a Galaxy Master branch installation (or specific commitVotes: 0GitHub stars: 16
- Gallery Benchmark Data ExtractionUse when you have access to a computation-times table or performanceVotes: 0GitHub stars: 16
- Gam Model Diagnostic EvaluationUse when after fitting candidate GAM splines with B-spline basis functionsVotes: 0GitHub stars: 16
- Gap Filling Algorithm SelectionUse when when processing untargeted LC-MS data with SLAW and observingVotes: 0GitHub stars: 16
- Gaussian Peak Shape EvaluationUse when after peak detection on a composite mass track has identifiedVotes: 0GitHub stars: 16
- Gaussian Peakshape Fitting EvaluationUse when after peak detection on mass track segments using find_peaks,Votes: 0GitHub stars: 16
- Gaussian Process Regression Model FittingUse when after you have accumulated experimental MS data from ≥2 LC gradientVotes: 0GitHub stars: 16
- Gaussian Process Uncertainty QuantificationUse when after collecting observed separation efficiency scores at sampledVotes: 0GitHub stars: 16
- Gc Ci Ms Data ProcessingUse when you have vendor-format GC-CI-MS raw data from a stable isotopeVotes: 0GitHub stars: 16
- Gc Column Polarity Specific Ri FilteringUse when you have a combined EI mass spectral library (MSP format) lackingVotes: 0GitHub stars: 16
- Gc Ims Matrix Table GenerationUse when after integratePeaks has been executed with a chosen integrationVotes: 0GitHub stars: 16
- Gc Ims Peak Alignment EvaluationUse when after peak detection in GC-IMS preprocessing, when you needVotes: 0GitHub stars: 16
- Gc Ms Abundance PreprocessingUse when after autoQ has extracted isotopologue peak area measurementsVotes: 0GitHub stars: 16
- Gc Ms Chromatogram ProcessingUse when when working with raw GC-MS data in NetCDF (ANDI) format thatVotes: 0GitHub stars: 16
- Gc Ms Data Preprocessing And NormalizationUse when you have raw GC-MS data (aroma, breath, or other volatile analyteVotes: 0GitHub stars: 16
- Gc Ms Molecular Family OrganizationUse when after auto-deconvolution of GC-MS data has produced a tableVotes: 0GitHub stars: 16
- Gc Ms Spectral DeconvolutionUse when you have raw GC-MS data (in netCDF or vendor format) containingVotes: 0GitHub stars: 16
- Gc Ms Spectral Library MatchingUse when when you have GC-MS data with detected peaks that require structuralVotes: 0GitHub stars: 16
- Gc Ms Spectral PreprocessingUse when you have raw GC-MS data files containing overlapped peaks (unresolvedVotes: 0GitHub stars: 16
- Gc Ms Spectral Similarity ClusteringUse when when you have deconvolved GC-MS spectra (post-deconvolutionVotes: 0GitHub stars: 16
- Gcf Mf Hierarchical AggregationUse when when you have predicted BGC-spectrum IOKR scores or other pairwiseVotes: 0GitHub stars: 16
- Gcf Mf Link Scoring ComputationUse when you have paired GCF and MF datasets with strain membership informationVotes: 0GitHub stars: 16
- Gcf Mf Link ScoringUse when after BGC detection and clustering (producing GCFs) and metabolomicsVotes: 0GitHub stars: 16
- Gcf Spectra Association RankingUse when when you have integrated genomic data (GCFs from AntiSMASH viaVotes: 0GitHub stars: 16
- Gcims Dataset Object CreationUse when you have raw GCIMS sample files (from a GC–IMS instrument) andVotes: 0GitHub stars: 16
- Gcms Spectrum DeconvolutionUse when input GC-MS data (netCDF or mzML format) exhibits overlappingVotes: 0GitHub stars: 16
- Gcxgc Chromatogram Object ManipulationUse when you have raw GCxGC-MS data in NetCDF format that contains instrumentalVotes: 0GitHub stars: 16
- Gcxgc Ms Multivariate AnalysisUse when after preprocessing a set of aligned 2D-TIC (two-dimensionalVotes: 0GitHub stars: 16
- Gcxgc Preprocessed Data HandlingUse when you have preprocessed individual GCxGC-MS chromatograms (eachVotes: 0GitHub stars: 16
- Gene Cluster Family Formation And Similarity ClusteringUse when you have antiSMASH v5.0.0 BGC predictions from a set of microbialVotes: 0GitHub stars: 16
- Generalized Additive Model FittingUse when when a feature table from LC-MS metabolomic profiling containsVotes: 0GitHub stars: 16
- Generalized Additive Model Hyperparameter OptimizationUse when when fitting a nonlinear retention time (RT) mapping splineVotes: 0GitHub stars: 16
- Generic Hdf5 Library Api UsageUse when when you have converted multidimensional MS data to MZA HDF5Votes: 0GitHub stars: 16
- Genome Annotation Format ComparisonUse when when running metabologenomic RiPP detection pipelines (MetaMiner)Votes: 0GitHub stars: 16
- Genome Cluster Family Scoring ComputationUse when you have pre-processed AntiSMASH BGC annotations (optionallyVotes: 0GitHub stars: 16
- Genome Identifier LookupUse when a paired omics project JSON document contains genome identifiersVotes: 0GitHub stars: 16
- Genome Identifier Organism MappingUse when a paired omics project record contains a genome identifier fieldVotes: 0GitHub stars: 16
- Genome Sequence MiningUse when you have assembled genomic DNA sequences (contigs in FASTA format,Votes: 0GitHub stars: 16
- Genomic Metabolomic Link RankingUse when you have paired genomic (BGCs clustered into GCFs via BiG-SCAPE)Votes: 0GitHub stars: 16
- Gensim Pipeline ExecutionUse when you have an MS2 spectral file (MGF format) from LC-MS/MS metabolomicsVotes: 0GitHub stars: 16
- Ggplot2 Geom Treemap RenderingUse when after running qc_summary() on a filtered mpactr object and aggregatingVotes: 0GitHub stars: 16
- Gibbs Sampler Implementation And ConvergenceUse when your metabolomics dataset contains missing values below a knownVotes: 0GitHub stars: 16
- Git Repository Cloning And Version ControlUse when when you need to reproduce a computational workflow describedVotes: 0GitHub stars: 16
- Github Actions Api IntegrationUse when when you need to verify that a GitHub Actions workflow (suchVotes: 0GitHub stars: 16