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Claude Skills by a5c-ai
github.com/a5c-ai2,120 skills40 installs3,476 views
- Deepvariant CallerDeepVariant deep learning variant calling skill for high-accuracy SNV and indel detectionVotes: 0GitHub stars: 1,760
- Deseq2 Differential ExpressionDESeq2 differential expression analysis skill with normalization, statistical modeling, and visualizationVotes: 0GitHub stars: 1,760
- Fastqc Quality AnalyzerSequencing quality control skill for assessing read quality, adapter contamination, and sequence compositionVotes: 0GitHub stars: 1,760
- Fusion Gene DetectorGene fusion detection skill for oncology applications with multiple caller integrationVotes: 0GitHub stars: 1,760
- Ga4gh Standards ValidatorGA4GH standards compliance skill for data sharing and interoperabilityVotes: 0GitHub stars: 1,760
- Gatk Variant CallerGATK best practices skill for germline and somatic variant calling with joint genotypingVotes: 0GitHub stars: 1,760
- Giab Benchmark ValidatorGenome in a Bottle benchmark validation skill for pipeline accuracy assessmentVotes: 0GitHub stars: 1,760
- Gsea Pathway AnalyzerGene Set Enrichment Analysis skill for functional annotation and pathway interpretationVotes: 0GitHub stars: 1,760
- Hipaa Compliance ValidatorHIPAA compliance validation skill for genomic data handling and auditVotes: 0GitHub stars: 1,760
- Hpo Phenotype MatcherHuman Phenotype Ontology skill for phenotype-driven gene prioritizationVotes: 0GitHub stars: 1,760
- Humann Functional ProfilerHUMAnN functional profiling skill for metagenomic pathway analysisVotes: 0GitHub stars: 1,760
- Igv Genome BrowserIGV integration skill for interactive genome visualization and reviewVotes: 0GitHub stars: 1,760
- Kraken2 Taxonomic ClassifierKraken2 taxonomic classification skill for rapid metagenomic read assignmentVotes: 0GitHub stars: 1,760
- Mageck Crispr AnalyzerMAGeCK CRISPR screen analysis skill for gene essentiality scoringVotes: 0GitHub stars: 1,760
- Maxquant ProcessorMaxQuant mass spectrometry skill for protein identification and quantificationVotes: 0GitHub stars: 1,760
- Megahit AssemblerMEGAHIT metagenomic assembly skill for reconstructing genomes from short readsVotes: 0GitHub stars: 1,760
- Metaphlan ProfilerMetaPhlAn metagenomic profiling skill for species-level community compositionVotes: 0GitHub stars: 1,760
- Nextflow Pipeline ExecutorNextflow workflow management skill for reproducible bioinformatics pipelinesVotes: 0GitHub stars: 1,760
- Perseus Statistical AnalyzerPerseus statistical analysis skill for proteomics data analysis and visualizationVotes: 0GitHub stars: 1,760
- Pharmgkb AnnotatorPharmGKB pharmacogenomics annotation skill for drug-gene interaction assessmentVotes: 0GitHub stars: 1,760
- Phylogenetics Tree BuilderPhylogenetic analysis skill for constructing evolutionary trees and assessing relationshipsVotes: 0GitHub stars: 1,760
- Pymol VisualizerPyMOL molecular visualization skill for structure rendering and analysisVotes: 0GitHub stars: 1,760
- Qiime2 Microbiome AnalyzerQIIME2 microbiome analysis skill for 16S rRNA profiling and diversity analysisVotes: 0GitHub stars: 1,760
- Rdkit ChemoinformaticsRDKit chemoinformatics skill for molecular property calculation and compound library managementVotes: 0GitHub stars: 1,760
- Salmon QuantifierSalmon pseudo-alignment skill for fast and accurate transcript quantificationVotes: 0GitHub stars: 1,760
- Samtools Bam ProcessorBAM/SAM file manipulation skill for sorting, indexing, filtering, and extracting alignment dataVotes: 0GitHub stars: 1,760
- Seurat Single Cell AnalyzerSeurat single-cell analysis skill for clustering, annotation, and trajectory analysisVotes: 0GitHub stars: 1,760
- Singularity Container ManagerSingularity container management skill for HPC-compatible containerized executionVotes: 0GitHub stars: 1,760
- Snakemake Workflow ManagerSnakemake workflow management skill for rule-based pipeline executionVotes: 0GitHub stars: 1,760
- Star Rnaseq AlignerSTAR alignment skill for splice-aware RNA-seq read mapping with comprehensive QC metricsVotes: 0GitHub stars: 1,760
- String Network AnalyzerSTRING protein interaction network skill for functional enrichment and network visualizationVotes: 0GitHub stars: 1,760
- Structural Variant DetectorStructural variant detection skill for identifying CNVs, inversions, translocations, and complex rearrangementsVotes: 0GitHub stars: 1,760
- Tmb Msi CalculatorTumor mutation burden and microsatellite instability calculation skill for immunotherapy biomarkersVotes: 0GitHub stars: 1,760
- Ucsc Genome Browser QuerierUCSC Genome Browser query skill for genome annotation retrieval and track data accessVotes: 0GitHub stars: 1,760
- Vep Variant AnnotatorVariant Effect Predictor skill for comprehensive variant annotation with clinical database integrationVotes: 0GitHub stars: 1,760
- Adverse Event ReporterAdverse event monitoring and reporting skill for MDR/MEDWATCH complianceVotes: 0GitHub stars: 1,760
- Aiml Validation FrameworkAI/ML medical device validation skill implementing FDA's GMLP principlesVotes: 0GitHub stars: 1,760
- Biocompatibility Test SelectorBiocompatibility test selection and protocol recommendation skill based on device categorizationVotes: 0GitHub stars: 1,760
- Bioreactor Protocol GeneratorBioreactor culture protocol development skill for tissue construct maturationVotes: 0GitHub stars: 1,760
- Clinical Literature ReviewerSystematic literature review skill for clinical evaluation supporting regulatory submissionsVotes: 0GitHub stars: 1,760
- Clinical Study DesignerClinical study design skill for medical device trials including IDE studies and post-market studiesVotes: 0GitHub stars: 1,760
- Cybersecurity Risk AssessorMedical device cybersecurity risk assessment skill per FDA premarket and postmarket guidanceVotes: 0GitHub stars: 1,760
- Design Fmea GeneratorDesign Failure Mode and Effects Analysis (DFMEA) skill for systematic design risk identificationVotes: 0GitHub stars: 1,760
- Design Review FacilitatorDesign review planning and execution skill for structured design phase gate reviews per 21 CFR 820.30Votes: 0GitHub stars: 1,760
- Dicom Conformance ValidatorDICOM conformance testing and integration skill for medical imaging systemsVotes: 0GitHub stars: 1,760
- Eu Mdr Gspr MapperEU MDR General Safety and Performance Requirements (GSPR) mapping and compliance documentation skillVotes: 0GitHub stars: 1,760
- Extractables Leachables AnalyzerE&L study design and data analysis skill for chemical characterization of medical devicesVotes: 0GitHub stars: 1,760
- Fatigue Life PredictorFatigue life prediction skill for implants and load-bearing devices using validated approachesVotes: 0GitHub stars: 1,760
- Fda 510k Submission GeneratorAutomated 510(k) premarket notification preparation for generating submission packages, predicate device comparisons, and substantial equivalence argumentsVotes: 0GitHub stars: 1,760
- Fea Mesh GeneratorFinite element mesh generation skill optimized for biomedical geometries including implants, anatomical structures, and tissue modelsVotes: 0GitHub stars: 1,760