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Workflow Checklist

ASecurity

Sub-skill of nextflow-pipelines: Workflow Checklist.

  • 17 stars
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  • Added September 9, 2026
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Security analysis

A100/100

Scanned September 9, 2026

npx -y skills add vamseeachanta/workspace-hub --skill workflow-checklist --agent claude-code

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SKILL.md
---
name: nextflow-pipelines-workflow-checklist
description: 'Sub-skill of nextflow-pipelines: Workflow Checklist.'
version: 1.0.0
category: science
type: reference
scripts_exempt: true
---

# Workflow Checklist

## Workflow Checklist


```
- [ ] Step 0: Acquire data (if from GEO/SRA)
- [ ] Step 1: Environment check (MUST pass)
- [ ] Step 2: Select pipeline (confirm with user)
- [ ] Step 3: Run test profile (MUST pass)
- [ ] Step 4: Create samplesheet
- [ ] Step 5: Configure & run (confirm genome with user)
- [ ] Step 6: Verify outputs
```

---

Attribution

vamseeachantaView sourceSee grades on GitHubMore from vamseeachanta

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