Configure and manage MCP providers for Agent Toolkit — setup, list, doctor, and per-tool
Scanned 9/2/2026
Install to Claude Code
npx -y skills add ulises-jeremias/agent-toolkit --skill mcp --agent claude-codeInstalls into .claude/skills of the current project.
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---
name: mcp
description: Configure and manage MCP providers for Agent Toolkit — setup, list, doctor, and per-tool
deployment.
origin:
type: first-party
metadata:
author: ulises-jeremias
version: '1.0'
tags:
- mcp
- integrations
- github
- slack
- context
---
# MCP
Wire **Model Context Protocol** servers so agents can call external tools (GitHub, ClickUp, Slack, etc.) natively. This skill wraps `agent-toolkit mcp` and the MCP definitions in `mcp/` and `~/.local/share/agent-toolkit/mcp/`.
## When to use
- User asks "setup MCP", "connect GitHub/ClickUp/Slack", or an agent fails with MCP not configured.
- After `agent-toolkit install` — MCP needs auth beyond file copy.
- `agent-toolkit doctor` reports MCP integration missing.
## Prerequisites
- `agent-toolkit` installed; `mcp/` definitions exist in the repo or `~/.local/share/agent-toolkit/mcp/`.
- Auth for each provider: `gh auth login` (GitHub), `clickup auth login` (ClickUp), etc. Keys in `~/.config/agent-toolkit/` or env.
- Target tool supports MCP (Claude Code, Cursor, OpenCode — see `docs/MCP.md`).
## Workflow
### 1. Discover available providers
```bash
agent-toolkit mcp list
agent-toolkit mcp doctor
cat docs/MCP.md
ls mcp/
ls ~/.local/share/agent-toolkit/mcp/ 2>&1 | head
```
### 2. Setup a provider
```bash
agent-toolkit mcp setup --provider github
agent-toolkit mcp setup --provider clickup
# Or target a specific tool:
agent-toolkit plugin sync --tools claude-code # also syncs MCP for that tool
```
For manual config, copy from `distributions/` or `mcp/` templates to `~/.config/<tool>/mcp.json` per `docs/MCP.md` — prefer the CLI.
### 3. Verify and use
```bash
agent-toolkit mcp doctor
agent-toolkit doctor # check Integrations section
# In agent: try a tool call that needs MCP, e.g., gh pr view or clickup task list
```
If `doctor` flags missing auth, run `gh auth status` / `clickup auth status` and re-setup.
### 4. Deploy with profiles
`agent-toolkit install` copies MCP templates; `mcp setup` authenticates them. For per-project MCP (e.g., Copilot):
```bash
agent-toolkit install --tools copilot --dry-run # shows would-copy for Copilot MCP
```
## Boundaries
- Never commit secrets — MCP auth lives in `~/.config/agent-toolkit/` or `~/.config/<provider>/`, not the repo. Use `.env.example` for templates.
- Do not hand-edit tool MCP JSON when `mcp setup` can do it — it handles path and env correctly.
- For swarms: MCP is per-runner, not per-run. Ensure the host's MCP is configured before `swarm start`.
## Delegates to
| Need | Skill |
|------|-------|
| Repo discovery before MCP wiring | `assistant` |
| Swarm that needs MCP tools | `swarm` |
| GitHub PR after swarm | `github-cli-workflow` |
| ClickUp/Slack tasks | `clickup-cli`, `slack-cli`, `linear` |

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