Generate exactly one child hypothesis by combining complementary strengths from multiple parent hypotheses.
Scanned 9/7/2026
Install to Claude Code
npx -y skills add panjose/Co-Scientist --skill hypothesis-evolve-combination --agent claude-codeInstalls into .claude/skills of the current project.
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---
name: hypothesis-evolve-combination
description: Generate exactly one child hypothesis by combining complementary strengths from multiple parent hypotheses.
---
# hypothesis-evolve-combination
Goal:
- Generate exactly one child hypothesis by combining complementary strengths from multiple parent hypotheses.
Inputs:
- `research_plan/RESEARCH_PLAN.json`
- selected parent `hypotheses/<id>/HYPOTHESIS.json` artifacts
- parent review artifacts
- active `state/STRATEGY_PLAN.json`
Outputs:
- `hypotheses/<id>/HYPOTHESIS.json`
- `hypotheses/<id>/HYPOTHESIS.md`
- `hypotheses/<id>/ORIGIN.json`
Context Loading:
- Open `skills/shared-references/schema-index.md`.
- Read `packages/agent_contracts/hypothesis.py` and confirm the exact `HypothesisContract` shape before writing `hypotheses/<id>/HYPOTHESIS.json`.
- Read `research_plan/RESEARCH_PLAN.json`.
- Read `state/STRATEGY_PLAN.json`.
- Read the selected parent hypotheses and their review bundles.
- Confirm that the round selected `combination_evolution`.
Execution Prompt Contract:
- System Intent:
- You are synthesizing one stronger child hypothesis from the complementary strengths of multiple parents.
- Required Reasoning Focus:
- Preserve the strongest pieces from each parent.
- Resolve contradictions instead of ignoring them.
- The child must be stronger than any single parent on at least two meaningful dimensions.
- Do Not Do:
- Do not concatenate parent text.
- Do not leave contradictions unresolved.
- Quality Floor:
- The child must directly address at least one specific weakness from the parent review bundle.
- `origin.content.statement` must name concrete materials, catalysts, reaction conditions, mechanistic variables, or experimental targets from the parent and research goal.
- `origin.content.mechanism` must explain a causal chain; do not write only generic phrases such as `improved mechanism`, `targeted improvement`, or `review-identified weaknesses`.
- `origin.content.experimental_design` must include 3-6 numbered steps with measurable readouts, controls, or decision thresholds.
- Do not use generic refinement placeholder steps such as `Apply targeted improvement`, `Characterize with standard techniques`, `Benchmark against parent`, or `Validate improvement quantitatively`.
- If the research plan, parent hypothesis, or parent review bundle is missing, stop and report the missing artifact instead of guessing.
- Output Shape:
- Emit the canonical `HypothesisContract`.
- `origin.strategy`: `combination_evolution`
- Keep the statement, mechanism, and experimental design unified rather than parent-segmented.
Execution Steps:
1. Open `skills/shared-references/schema-index.md`, then read `packages/agent_contracts/hypothesis.py` before writing `hypotheses/<id>/HYPOTHESIS.json`.
2. Identify the complementary strengths and contradictions across the parent set.
3. Produce exactly one combined child hypothesis.
4. Persist canonical `HYPOTHESIS.json`, `HYPOTHESIS.md`, and `ORIGIN.json`.
5. Validate the emitted hypothesis artifact.
Completion Rule:
- This skill is complete only when one combined child hypothesis has been written in canonical form.
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