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CLI tools, utilities, converters, workflow automation, and productivity helpers
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Showing 16,081–16,104 of 48,954 skills
- Microsoft Skills .Github Plugins Azure Sdk Python Skills Azure Storage Blob PyAzure Blob Storage SDK for Python. Use for uploading, downloading, listing blobs, managing containers, and blob lifecycle. Triggers: "blob storage", "BlobServiceClient", "ContainerClient", "BlobClient", "upload blob", "download blob".Votes: 0GitHub stars: 3
- Brycewang Stanford Awesome Agent Skills For Empirical Research Skills 13 Scunning1975 MixtapeTools Skills Referee2Systematic audit and review by Referee 2. Two modes — "deck" reviews slide presentations for rhetoric, visual quality, and compile cleanliness; "code" performs cross-language replication and econometric audit of empirical pipelines. Use when reviewing slides, auditing code, or verifying replication.Votes: 0GitHub stars: 3
- Sorgfresser Valid Efficiency ScoreCompute sorgfresser/valid_efficiency_score via the HuggingFace `evaluate` library. Use when the user has predictions + references and wants the canonical implementation of sorgfresser/valid_efficiency_score.Votes: 0GitHub stars: 3
- Scivisagentbench EvalEvaluates agentic systems' ability to perform scientific data analysis and visualization workflows. It probes outcome correctness, process behavior, and computational efficiency across real-world scientific domains and tools. Use when the user wants to benchmark on SciVisAgentBench, or asks about evaluating this task. Reports outcome correctness.Votes: 0GitHub stars: 3
- Mobileworld EvalEvaluates autonomous mobile agents on long-horizon, cross-application workflows, requiring them to handle ambiguous instructions via agent-user interaction and integrate external tools via MCP. It probes planning, GUI grounding, clarification strategies, and tool orchestration in real-world mobile environments. Use when the user wants to benchmark on MobileWorld, or asks about evaluating this task. Reports Success Rate (SR).Votes: 0GitHub stars: 3
- Mas Bench EvalEvaluates the ability of mobile GUI agents to complete complex, real-world automation tasks across single-app and cross-app scenarios. It specifically probes how well agents can integrate predefined or self-generated shortcuts (APIs, deep links, RPA scripts) with standard GUI interactions to improve task success, execution efficiency, and cost-effectiveness. Use when the user wants to benchmark on MAS-Bench, or asks about evaluating this task. Reports SR.Votes: 0GitHub stars: 3
- Reproducible ResearchPlan and execute reproducible computational research with explicit inputs, environments, provenance, deterministic steps, validation, and workspace outputs. Use for analyses that must be rerun, audited, or handed to another researcher.Votes: 0GitHub stars: 4
- PymatgenMaterials science toolkit. Crystal structures (CIF, POSCAR), phase diagrams, band structure, DOS, Materials Project integration, format conversion, for computational materials science.Votes: 0GitHub stars: 4
- Trl Fine TuningFine-tune LLMs using reinforcement learning with TRL - SFT for instruction tuning, DPO for preference alignment, PPO/GRPO for reward optimization, and reward model training. Use when need RLHF, align model with preferences, or train from human feedback. Works with HuggingFace Transformers.Votes: 0GitHub stars: 4
- GgufGGUF format and llama.cpp quantization for efficient CPU/GPU inference. Use when deploying models on consumer hardware, Apple Silicon, or when needing flexible quantization from 2-8 bit without GPU requirements.Votes: 0GitHub stars: 4
- Bio Workflows Riboseq PipelineEnd-to-end Ribo-seq analysis from FASTQ through periodicity QC, P-site calibration, ORF detection, translation efficiency, and stalling. Use when orchestrating a full ribosome profiling pipeline and deciding harvest/dedup/alignment options and which downstream analyses the library can support.Votes: 0GitHub stars: 4
- Bio Workflows Genome Assembly PipelineOrchestrates an end-to-end de novo genome assembly project, routing each step to the right genome-assembly skill rather than restating it. Profiles the genome first (k-mer spectrum -> size, heterozygosity, ploidy), QCs reads, chooses an assembly path by data type (SPAdes for Illumina, Flye for noisy long reads, hifiasm for HiFi, metaFlye for communities), polishes only when needed, decontaminates, scaffolds with Hi-C, and finishes with three-axis QC (contiguity + completeness + correctness). ...Votes: 0GitHub stars: 4
- Tooluniverse Claude Code PluginInstall the ToolUniverse Claude Code plugin in one step — provides MCP server with 1000+ scientific tools, 120+ research skills, slash commands, hooks, and the research agent. Use for first-time plugin install, troubleshooting plugin not loading, verifying MCP server connection, listing API key requirements, or configuring auto-update.Votes: 0GitHub stars: 4
- AudiocraftPyTorch library for audio generation including text-to-music (MusicGen) and text-to-sound (AudioGen). Use when you need to generate music from text descriptions, create sound effects, or perform melody-conditioned music generation.Votes: 0GitHub stars: 4
- Tooluniverse Molecular CloningMolecular cloning assembly design — Gibson Assembly (overlap design for seamless multi-fragment joining) and Golden Gate Assembly (Type IIS / BsaI / BbsI design with unique 4-bp fusion overhangs). Use when you need to plan how to join DNA fragments into a construct, design assembly overlaps/overhangs, or decide between cloning methods. Covers the domestication (internal-site removal), overhang-uniqueness, and overlap-Tm rules. For PCR primers to generate the fragments, see tooluniverse-primer...Votes: 0GitHub stars: 4
- DeeptoolsNGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.Votes: 0GitHub stars: 4
- Cancer Genomics AnalysisComputational cancer genomics workflows. Somatic mutation detection and annotation, structural variation characterization, copy number analysis, tumor purity/ploidy estimation, NMF metagene extraction, and DNA damage response network analysis. For cancer mutation databases use cosmic-database; for variant clinical significance use clinvar-database.Votes: 0GitHub stars: 4
- Bio Chipseq Spike In NormalizationNormalizes ChIP-seq data using exogenous spike-in (ChIP-Rx with Drosophila chromatin per Orlando 2014 / Egan 2016; E. coli carryover for CUT&RUN/CUT&Tag). Distinguishes RRPM from Rx-Input scaling, integrates with DiffBind / DESeq2 / edgeR / csaw via sizeFactors and DiffBind library-size vectors, and applies the Patel et al 2024 *Nat Biotechnol* review's failure-mode framework to validate that normalization is correctly applied at the read level (not peak counts). Use when global signal shifts...Votes: 0GitHub stars: 4
- Bio Reference OperationsGenerate consensus sequences and manage reference files using samtools. Use when creating consensus from alignments, indexing references, or creating sequence dictionaries.Votes: 0GitHub stars: 4
- Bio Alignment SortingSort alignment files by coordinate or read name using samtools and pysam. Use when preparing BAM files for indexing, variant calling, or paired-end analysis.Votes: 0GitHub stars: 4
- Parallax Make House ViewSynthesize a draft Parallax house view by orchestrating macro_analyst + get_telemetry MCP outputs across the 14 weighted markets, route the draft through the shared confirmation gate, and save through the same path /parallax-load-house-view uses. The synthesized view carries `generator_synthesis` provenance (distinct from ingested views' `prose_extraction`) and lands in `~/.parallax/active-house-view/` like any other house view. Use when the bank has no CIO take to ingest, when prepping a Par...Votes: 0GitHub stars: 5
- Parallax Macro OutlookFull macro regime analysis with optional equity screening: country coverage, economic outlook, regime signals, factor tilt implications, and top-scoring equities in the target market via Parallax MCP tools. Anchored on the regime question ('what is the regime in [market]?'). NOT for country/region equity discovery ('what should I buy in [country]?' — use /parallax-country-deep-dive), not for portfolio-level morning briefs (use /parallax-morning-brief), not for single stock analysis (use /para...Votes: 0GitHub stars: 5
- Parallax Watchlist MonitorMonitor a watchlist of tickers: flag score changes, news alerts, technical shifts, and analyst updates via Parallax MCP tools. Provide list of symbols. NOT for single stock analysis (use /parallax-deep-dive), not for portfolio diagnostics (use /parallax-morning-brief), not for weighted client books ranked by who to call (use /parallax-desk-call-list), not for building a portfolio (use /parallax-portfolio-builder).Votes: 0GitHub stars: 5
- Parallax Score ExplainerExplain Parallax scores, factors, and methodology in plain language. Why does a stock score this way? What would change it? Uses methodology docs and score data. NOT for stock analysis (use /parallax-should-i-buy), not for deep dives (use /parallax-deep-dive), not for portfolio diagnostics (use /parallax-portfolio-checkup).Votes: 0GitHub stars: 5