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CLI tools, utilities, converters, workflow automation, and productivity helpers
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Showing 14,257–14,280 of 47,547 skills
- Polymer Property AnalysisPolymer & Material Property Analysis - Analyze polymer properties: composition, symmetry, density, and lattice parameters for material design. Use this skill for polymer science tasks involving MaterialCompositionAnalyzer CalculateSymmetry CalculateDensity MofLattice. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Natural Product AnalysisNatural Product Analysis - Analyze natural products: name to SMILES, PubChem lookup, structural analysis, and KEGG natural product search. Use this skill for natural products chemistry tasks involving NameToSMILES search pubchem by name ChemicalStructureAnalyzer kegg find. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Molecular Similarity SearchSearch for similar molecules using Tanimoto similarity with Morgan fingerprints to identify structurally related compounds.Votes: 0GitHub stars: 170
- Molecular Properties CalculationCalculate basic molecular properties from SMILES including molecular weight, formula, atom counts, and exact mass.Votes: 0GitHub stars: 170
- Molecular Fingerprint AnalysisMolecular Fingerprint Analysis - Fingerprint analysis: topology descriptors, structure complexity, similarity calculation, and AromaticityAnalysis. Use this skill for cheminformatics tasks involving calculate mol topology calculate mol structure complexity calculate smiles similarity AromaticityAnalyzer. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Functional Group ProfilingFunctional Group Profiling - Profile functional groups: radical assignment, H-bond analysis, aromaticity, and abbreviation condensation. Use this skill for organic chemistry tasks involving AssignRadicals GetHBANum AromaticityAnalyzer CondenseAbbreviationSubstanceGroups. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Compound Database CrossrefCross-Database Compound Lookup - Cross-reference compound across databases: PubChem, ChEMBL, KEGG, and CAS number lookup. Use this skill for chemical information tasks involving get compound by name get molecule by name kegg find CASToPrice. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Chemical Structure ComparisonChemical Structure Comparison - Compare chemical structures: get SMILES, analyze structures, compute similarity, and check PubChem records. Use this skill for cheminformatics tasks involving NameToSMILES ChemicalStructureAnalyzer calculate smiles similarity get compound by name. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Chemical Structure AnalysisAnalyze chemical structures from compound names to retrieve SMILES, molecular formulas, molecular weight, and LogP values.Votes: 0GitHub stars: 170
- Chemical Property ProfilingChemical Property Profiling - Profile chemical properties: basic info, hydrophobicity, H-bonds, charges, and molecular complexity. Use this skill for physical chemistry tasks involving calculate mol basic info calculate mol hydrophobicity calculate mol hbond calculate mol charge calculate mol complexity. Combines 5 tools from 1 SCP server(s).Votes: 0GitHub stars: 170
- Chemical Patent AnalysisChemical Patent & Novelty Analysis - Analyze chemical novelty: PubChem substructure CAS search, ChEMBL similarity search, compound synonyms, and literature. Use this skill for patent chemistry tasks involving get substructure cas get similarity by smiles get compound synonyms by name search literature. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Chembl Molecule SearchSearch ChEMBL database for molecule information by name to retrieve bioactivity data and chemical structures.Votes: 0GitHub stars: 170
- Cell Line Assay AnalysisCell Line Assay Analysis - Analyze cell line assays: ChEMBL cell line info, assay search, activity data, and target info. Use this skill for cell biology tasks involving get cell line by id search assay search activity get target by name. Combines 4 tools from 1 SCP server(s).Votes: 0GitHub stars: 170
- Cas Compound LookupCAS Number Compound Lookup - Look up compounds by CAS: convert CAS to price/availability, get PubChem data, get ChEMBL info, and structure analysis. Use this skill for chemical information tasks involving CASToPrice get compound by name get molecule by name ChemicalStructureAnalyzer. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Bioassay AnalysisBioassay Data Analysis - Analyze bioassay data: PubChem assay summary, ChEMBL activity search, compound properties, and target info. Use this skill for bioassay science tasks involving get assay summary by cid search activity calculate mol basic info get target by name. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Aliphatic Ring AnalysisRing System Analysis - Analyze ring systems: count aliphatic carbocycles, analyze aromaticity, compute topology, and structure complexity. Use this skill for organic chemistry tasks involving GetAliphaticCarbocyclesNum AromaticityAnalyzer calculate mol topology calculate mol structure complexity. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- MeowFor any input, respond with a single meow.Votes: 0GitHub stars: 170
- Web Literature MiningScientific Literature Mining - Mine scientific literature: PubMed search, arXiv search, web search, and Tavily deep search. Use this skill for scientific informatics tasks involving pubmed search search literature search web tavily search. Combines 4 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Uniprot Protein RetrievalRetrieve protein sequences and functional information from UniProt database by protein name, enabling protein analysis and bioinformatics workflows.Votes: 0GitHub stars: 170
- Uniprot Deep AnalysisUniProt Deep Protein Analysis - Deep UniProt analysis: entry data, UniRef clusters, UniParc cross-references, and gene-centric view. Use this skill for protein science tasks involving get uniprotkb entry by accession get uniref cluster by id get uniparc entry by upi get gene centric by accession. Combines 4 tools from 1 SCP server(s).Votes: 0GitHub stars: 170
- Synthetic Biology DesignSynthetic Biology Design - Design synthetic biology construct: gene lookup, codon optimization, protein property prediction, and structure prediction. Use this skill for synthetic biology tasks involving get sequence id DegenerateCodonCalculatorbyAminoAcid calculate protein sequence properties pred protein structure esmfold. Combines 4 tools from 4 SCP server(s).Votes: 0GitHub stars: 170
- Structural Homology ModelingStructural Homology & Evolution Analysis - Analyze protein evolution: get gene tree from Ensembl, find homologs, compare sequences, and predict structure. Use this skill for evolutionary biology tasks involving get homology symbol get genetree member symbol calculate protein sequence properties pred protein structure esmfold. Combines 4 tools from 3 SCP server(s).Votes: 0GitHub stars: 170
- Proteome AnalysisProteome-Level Analysis - Analyze at proteome level: get proteome from UniProt, gene-centric view, functional annotation from STRING. Use this skill for proteomics tasks involving get proteome by id get gene centric by proteome get functional annotation. Combines 3 tools from 2 SCP server(s).Votes: 0GitHub stars: 170
- Protein Structure AnalysisProtein Structure Comprehensive Analysis - Comprehensive structure analysis: download PDB, extract chains, calculate geometry, quality metrics, and composition. Use this skill for structural biology tasks involving retrieve protein data by pdbcode extract pdb chains calculate pdb structural geometry calculate pdb quality metrics calculate pdb composition info. Combines 5 tools from 1 SCP server(s).Votes: 0GitHub stars: 170