Documentation

Docs, README files, API references, tutorials, specs, and changelogs

skills in category: 14,027
pages available: 585

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Showing 13,657–13,680 of 14,027 skills

Rmarkdown ReportsACreate reproducible bioinformatics analysis reports with R Markdown including code, results, and visualizations in HTML, PDF, or Word format. Use when generating analysis reports with RMarkdown.documentationexpressVotes: 0GitHub stars: 32
Quarto ReportsABuild reproducible scientific documents, presentations, and websites with Quarto supporting R, Python, Julia, and Observable JS. Use when creating reproducible reports with Quarto.documentationpythonbashVotes: 0GitHub stars: 32
YoutubeCEnables Claude to manage YouTube subscriptions, playlists, and viewing experience through browser automationdocumentationpythongoVotes: 0GitHub stars: 207
QuantificationAProtein quantification from mass spectrometry data including label-free (LFQ, intensity-based), isobaric labeling (TMT, iTRAQ), and metabolic labeling (SILAC) approaches. Use when extracting protein abundances from MS data for differential analysis.documentationpythongoVotes: 0GitHub stars: 32
Regulatory AffairsAAutomates the drafting of regulatory documents (e.g., FDA CTD sections) with citation management and audit trails.documentationpythonbashVotes: 0GitHub stars: 32
Ctdna Mutation DetectionADetects somatic mutations in circulating tumor DNA using variant callers optimized for low allele fractions with UMI-based error suppression. Reliably detects mutations at VAF above 0.5 percent using consensus-based approaches. Use when identifying tumor mutations from plasma DNA or tracking specific variants.documentationpythongoVotes: 0GitHub stars: 32
Clustering PhenotypingAUnsupervised clustering and cell type identification for flow/mass cytometry. Covers FlowSOM, Phenograph, and CATALYST workflows. Use when discovering cell populations in high-dimensional cytometry data without predefined gates.documentationexpressVotes: 0GitHub stars: 32
Proximity OperationsAFind nearest features, search within windows, and extend intervals using closest, window, flank, and slop operations. Use when performing TSS proximity analysis, assigning enhancers to genes, defining promoter regions, or finding nearby genomic features.documentationpythongoVotes: 0GitHub stars: 32
Gtf Gff HandlingAParse, query, and convert GTF and GFF3 annotation files. Extract gene, transcript, and exon coordinates using gffread, gtfparse, and gffutils. Use when extracting specific features from gene annotations or converting between annotation formats.documentationpythonbashVotes: 0GitHub stars: 32
Structural Variant CallingACall structural variants (SVs) from short-read sequencing using Manta, Delly, and LUMPY. Detects deletions, insertions, inversions, duplications, and translocations that are too large for standard SNV callers. Use when detecting structural variants from short-read data.documentationgobashVotes: 0GitHub stars: 32
PreprocessingAQuality control, filtering, and normalization for single-cell RNA-seq using Seurat (R) and Scanpy (Python). Use for calculating QC metrics, filtering cells and genes, normalizing counts, identifying highly variable genes, and scaling data. Use when filtering, normalizing, and selecting features in single-cell data.documentationpythonVotes: 0GitHub stars: 32
CellAgentAUse CellTypeAgent to interpret marker genes, annotate scRNA-seq clusters, and coordinate multi-agent workflows for downstream analysis.documentationpythongoVotes: 0GitHub stars: 32
Gene Panel Design AgentAAI-powered design of targeted gene panels for clinical and research applications including cancer diagnostics, pharmacogenomics, and rare disease testing.documentationpythongoVotes: 0GitHub stars: 32
Changelog GeneratorAAutomatically creates user-facing changelogs from git commits by analyzing commit history, categorizing changes, and transforming technical commits into clear, customer-friendly release notes. Turns hours of manual changelog writing into minutes of automated generation.documentationgorefactoringVotes: 0GitHub stars: 32
Notion Research DocumentationAResearch across Notion and synthesize into structured documentation; use when gathering info from multiple Notion sources to produce briefs, comparisons, or reports with citations.documentationgodatabaseVotes: 0GitHub stars: 32
Notion Meeting IntelligenceAPrepare meeting materials with Notion context and Codex research; use when gathering context, drafting agendas/pre-reads, and tailoring materials to attendees.documentationgodatabaseVotes: 0GitHub stars: 32
Notion Knowledge CaptureACapture conversations and decisions into structured Notion pages; use when turning chats/notes into wiki entries, how-tos, decisions, or FAQs with proper linking.documentationdatabasedocumentationVotes: 0GitHub stars: 32
Skill CreatorAGuide for creating effective skills. This skill should be used when users want to create a new skill (or update an existing skill) that extends Claude''s capabilities with specialized knowledge, workflows, or tool integrations.documentationpythongoVotes: 0GitHub stars: 32
Mcp BuilderAGuide for creating high-quality MCP (Model Context Protocol) servers that enable LLMs to interact with external services through well-designed tools. Use when building MCP servers to integrate external APIs or services, whether in Python (FastMCP) or Node/TypeScript (MCP SDK).documentationtypescriptpythonVotes: 0GitHub stars: 32
Doc CoauthoringAGuide users through a structured workflow for co-authoring documentation. Use when user wants to write documentation, proposals, technical specs, decision docs, or similar structured content. This workflow helps users efficiently transfer context, refine content through iteration, and verify the doc works for readers. Trigger when user mentions writing docs, creating proposals, drafting specs, or similar documentation tasks.documentationrustgoVotes: 0GitHub stars: 32
Pptx ConstructionAPowerPoint generation for construction: project updates, stakeholder presentations, progress reports, bid presentations. Automated slide creation with charts and data.documentationpythongoVotes: 0GitHub stars: 299
Email ConstructionAEmail generation for construction workflows: RFI responses, submittal transmittals, meeting notices, change order notifications. Professional templates with context-aware content.documentationpythondocumentationVotes: 0GitHub stars: 299
Docx ConstructionAWord document generation for construction: contracts, proposals, reports, specifications, transmittals. Template-based with dynamic content insertion.documentationpythonbashVotes: 0GitHub stars: 299
Claims DocumentationADocument construction claims for disputes and recovery. Compile evidence, calculate damages, track notice requirements, and prepare claim packages.documentationpythongoVotes: 0GitHub stars: 299