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Data & Analytics
Data analysis, BI, visualization, datasets, statistics, and ML workflows
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Showing 12,049–12,072 of 12,625 skills
- MetricsCollect agent usage metrics from git history and generate health reports. Use when measuring agent adoption, reviewing system health, or producing periodic dashboards. Collects Invocation Rate, Coverage, Infrastructure Review, and Usage Distribution. Use when you say "collect agent metrics", "generate metrics dashboard", or "weekly metrics report".Votes: 0GitHub stars: 47
- 23 Integrative Dmr DegThis skill performs correlation analysis between differential methylation and differential gene expression, identifying genes with coordinated epigenetic regulation. It provides preprocessing and integration workflows, using promoter-level methylation–expression relationships.Votes: 0GitHub stars: 666
- 20 Toolbased Differential Tad AnalysisThis skill performs differential topologically associating domain (TAD) analysis using HiCExplorer's hicDifferentialTAD tool. It compares Hi-C contact matrices between two conditions based on existing TAD definitions to identify significantly altered chromatin domains.Votes: 0GitHub stars: 666
- 17 Toolbased Hic Compartments CallingThis skill performs PCA-based A/B compartments calling on Hi-C .mcool datasets using pre-defined MCP tools from the cooler-tools, cooltools-tools, and plot-hic-tools servers.Votes: 0GitHub stars: 666
- 13 Toolbased Known Motif EnrichmentThis skill should be used when users need to perform known motif enrichment analysis on ChIP-seq, ATAC-seq, or other genomic peak files using HOMER (Hypergeometric Optimization of Motif EnRichment). It identifies enrichment of known transcription factor binding motifs from established databases in genomic regions.Votes: 0GitHub stars: 666
- XlsxComprehensive spreadsheet creation, editing, and analysis with support for formulas, formatting, data analysis, and visualization. When Claude needs to work with spreadsheets (.xlsx, .xlsm, .csv, .tsv, etc) for: (1) Creating new spreadsheets with formulas and formatting, (2) Reading or analyzing data, (3) Modify existing spreadsheets while preserving formulas, (4) Data analysis and visualization in spreadsheets, or (5) Recalculating formulasVotes: 0GitHub stars: 3,543
- PredictForecast future states or outcomes based on current data and trends. Use when estimating future values, projecting trajectories, forecasting outcomes, or anticipating system behavior.Votes: 0GitHub stars: 4
- MeasureQuantify values with uncertainty bounds. Use when estimating metrics, calculating risk scores, assessing magnitude, or measuring any quantifiable property.Votes: 0GitHub stars: 4
- IntegrateCombine heterogeneous data sources into a unified model with conflict resolution, schema alignment, and provenance tracking. Use when merging data from multiple systems, consolidating information, or building comprehensive views.Votes: 0GitHub stars: 4
- Digital Twin Sync LoopRun the digital twin sync loop to synchronize real-world signals with a digital model. Use when updating digital twins, detecting drift, managing real-time state synchronization, or maintaining model-reality alignment.Votes: 0GitHub stars: 4
- Digital Twin BootstrapBuild a rigorous world model with state, dynamics, uncertainty, and provenance. Use when creating digital twins, constructing system representations, building simulation foundations, or establishing baseline world state.Votes: 0GitHub stars: 4
- Discord AnalyzeGenerate a comprehensive community health report from synced Discord messagesVotes: 0GitHub stars: 5
- Pdf Processing ProProduction-ready PDF processing with forms, tables, OCR, validation, and batch operations. Use when working with complex PDF workflows in production environments, processing large volumes of PDFs, or requiring robust error handling and validation.Votes: 0GitHub stars: 87
- BoltzgenAll-atom protein design using BoltzGen diffusion model. Use this skill when: (1) Need side-chain aware design from the start, (2) Designing around small molecules or ligands, (3) Want all-atom diffusion (not just backbone), (4) Require precise binding geometries, (5) Using YAML-based configuration. For backbone-only generation, use rfdiffusion. For sequence-only design, use proteinmpnn. For structure validation, use boltz.Votes: 0GitHub stars: 157
- BoltzStructure prediction using Boltz-1/Boltz-2, an open biomolecular structure predictor. Use this skill when: (1) Predicting protein complex structures, (2) Validating designed binders, (3) Need open-source alternative to AF2, (4) Predicting protein-ligand complexes, (5) Using local GPU resources. For QC thresholds, use protein-qc. For AlphaFold2 prediction, use alphafold. For Chai prediction, use chai.Votes: 0GitHub stars: 157
- Binder DesignGuidance for choosing the right protein binder design tool. Use this skill when: (1) Deciding between BoltzGen, BindCraft, or RFdiffusion, (2) Planning a binder design campaign, (3) Understanding trade-offs between different approaches, (4) Selecting tools for specific target types. For specific tool parameters, use the individual tool skills (boltzgen, bindcraft, rfdiffusion, etc.).Votes: 0GitHub stars: 157
- BindcraftEnd-to-end binder design using BindCraft hallucination. Use this skill when: (1) Designing protein binders with built-in AF2 validation, (2) Running production-quality binder campaigns, (3) Using different design protocols (fast, default, slow), (4) Need joint backbone and sequence optimization, (5) Want high experimental success rate. For backbone-only generation, use rfdiffusion. For QC thresholds, use protein-qc. For tool selection guidance, use binder-design.Votes: 0GitHub stars: 157
- AlphafoldValidate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences fold correctly, (2) Predicting binder-target complex structures, (3) Calculating confidence metrics (pLDDT, pTM, ipTM), (4) Self-consistency validation of designs, (5) Multi-chain complex prediction with AlphaFold-Multimer. For faster single-chain prediction, use esm. For QC thresholds, use protein-qc.Votes: 0GitHub stars: 157
- Specstory Project StatsFetch project statistics from SpecStory Cloud. Run when user says "get project stats", "show SpecStory stats", "project statistics", "how many sessions", or "SpecStory metrics".Votes: 0GitHub stars: 35
- Recraft AiGenerate, vectorize, upscale, replace background, variate, remove background, and transform images via Recraft API.Votes: 0GitHub stars: 665
- LoomManage Loom video recordings - list, share, and get analytics via Loom API.Votes: 0GitHub stars: 665
- HotjarAccess Hotjar recordings and heatmaps via API. Understand user behavior on your site.Votes: 0GitHub stars: 665
- Implementing Real User MonitoringImplement Real User Monitoring (RUM) to capture actual user performance data including Core Web Vitals and page load times. Use when setting up user experience monitoring or tracking custom performance events. Trigger with phrases like "setup RUM", "track Core Web Vitals", or "monitor real user performance".Votes: 0GitHub stars: 2,688
- Ga4Query Google Analytics 4 (GA4) data via the Analytics Data API. Use when you need to pull website analytics like top pages, traffic sources, user counts, sessions, conversions, or any GA4 metrics/dimensions. Supports custom date ranges and filtering.Votes: 0GitHub stars: 665