Garnatxa HpcC
Use whenever the user is working on, connecting to, submitting jobs to, troubleshooting, or asking about the Garnatxa HPC cluster at I2SysBio (UV/CSIC, Valencia). Covers SSH/VPN setup, SLURM submission and monitoring (sbatch, srun, sacct, squeue, scancel, sinfo, plotjob, squeue_/sacct_), choosing the right QoS, writing efficient job scripts (serial, threaded, MPI, array, dependencies), the Lmod module system, mamba/conda environments, Singularity containers, Nextflow and Snakemake pipelines o...
ai-agentspythongo
Skills Directory