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Claude Skills by sajor2000

github.com/sajor2000

68 skillsA× 67B× 10 installs84 views

Coding TutorAPersonalized coding tutorials that build on your existing knowledge and use your actual codebase for examples. Creates a persistent learning trail that compounds over time using the power of AI, spaced repetition and quizes.developmentpythongoVotes: 0GitHub stars: 3
Method Adversarial ReviewAChallenges a high-stakes analysis diff or plan with an adversarial pass and, when available, a cross-model (Claude/Codex) reviewer. Use when the user asks for an adversarial or cross-model review.datarustgitVotes: 0GitHub stars: 3
Method Anti SlopADetects and removes generic AI-writing tells from finished scientific prose, keeping passive Methods voice. Use when the user asks to de-slop wording; drafting goes to method-write.datagoVotes: 0GitHub stars: 3
Method BrainstormAExplores a research or analysis idea, compares study designs, and scopes requirements before planning. Use when the user wants to brainstorm or weigh designs; PICO framing goes to method-question.datagosqlVotes: 0GitHub stars: 3
Method ChecklistASelects EQUATOR reporting guidelines (CONSORT, STROBE, RECORD, PRISMA, TRIPOD+AI, TARGET, STARD, CLAIM) for a study. Use when the user asks which reporting checklist applies.datagogitVotes: 0GitHub stars: 3
Method CitationsABuilds evidence-traceable citations from PubMed and Paperclip into a DOCX with editable Zotero fields. Use when adding or repairing citations in a Word manuscript.researchdocumentationVotes: 0GitHub stars: 3
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Method Clean BranchesADeletes local git branches whose upstream is gone, and their worktrees, after confirmation. Use when the user asks to clean or prune gone branches.datagobashVotes: 0GitHub stars: 3
Method Clif Meta AnalysisAPlans formal R/Python meta-analysis. Use when pooling CLIF site effects or conducting a literature systematic review.datapythongoVotes: 0GitHub stars: 3
Method Clif TemplateAInitializes or audits a CLIF analysis repo against the official CLIF Project Template, with PHI and output safeguards. Use when creating or checking a CLIF project repo.datapythongoVotes: 0GitHub stars: 3
Method ClifAApplies CLIF (Common Longitudinal ICU data Format) rules: mCIDE versions, Parquet, UTC datetimes, no-PHI outputs. Use when the repo has CLIF tables, mCIDE, or CLIF_CLAUDE.md.datapythongoVotes: 0GitHub stars: 3
Method CohortADefines a reproducible study cohort: inclusion/exclusion, index event, pinned concepts, SQL, waterfall counts. Use when an EHR, OMOP, claims, or phenotype cohort is needed.datapythongoVotes: 0GitHub stars: 3
Method CommitACreates a focused conventional git commit that keeps raw data, PHI, and large outputs out of version control. Use when the user says commit or save changes.datagoshellVotes: 0GitHub stars: 3
Method Compound RefreshAAudits docs/solutions learnings for drift, then keeps, updates, merges, replaces, or marks them stale. Use when the user asks to refresh or clean up docs/solutions.ai-agentspythonrustVotes: 0GitHub stars: 3
Method CompoundARecords a validated analytical approach, methods decision, or reusable data-science pattern in docs/solutions. Use when the user wants to document or compound a learning.datapythongoVotes: 0GitHub stars: 3
Method Data QaAProfiles columns or runs a GO/NO-GO data-quality gate on an extract before SAP finalization, modeling, or unblinding. Use when the user asks to check data readiness.datapythongoVotes: 0GitHub stars: 3
Method DebugAReproduces, traces, and fixes failing analysis code, pipelines, or tests by finding the cause first. Use when the user reports an error, failing test, or broken or slow run.datapythonnodeVotes: 0GitHub stars: 3
Method Doc ReviewAReviews plans, SAPs, protocols, and manuscripts for clarity, completeness, and scope with persona reviewers. Use when the user asks to review a document, not code.datarustgoVotes: 0GitHub stars: 3
Method Evidence MapABuilds a source-backed evidence map for a biomedical question from PubMed, optionally deepened with Paperclip full text. Use when a SAP or manuscript needs mapped evidence.datagobashVotes: 0GitHub stars: 3
Method ExtractAExtracts methods, cohorts, endpoints, models, and assumptions from retrieved papers for SAP justification. Use when literature results need methods grounding.datapythonVotes: 0GitHub stars: 3
Method FabricARoutes Microsoft Fabric work (OneLake, Lakehouse, Warehouse, PySpark, Data Factory, Direct Lake, Fabric ML, KQL) with research guardrails. Use when a project uses Fabric.datapythongoVotes: 0GitHub stars: 3
Method FigureACreates and validates publication figures (ggplot2, matplotlib) with a journal-neutral clinical style and manifest. Use when the user wants a Kaplan-Meier, forest, calibration, ROC, or multi-panel figure.datapythongoVotes: 0GitHub stars: 3
Method Genome BuildAPins genome build, annotation release, contig naming, and liftover for genomics data. Use when the user mentions GRCh37/38, hg19/hg38, T2T, GENCODE/Ensembl versions, or liftover.datapythongoVotes: 0GitHub stars: 3
Method GrillAInterviews the user one question at a time to stress-test a study's goal, hypothesis, data, analysis, and journal, recommending answers. Use when the user says grill me.datagogitVotes: 0GitHub stars: 3
Method HandoffACreates or resumes a portable continuity record for a data-science task, keeping SAP and real-data gates. Use when work moves to another agent or a later session.dataVotes: 0GitHub stars: 3
Method IdeateAGenerates and ranks grounded research or analysis ideas from repo, literature, or topic context. Use when the user asks for ideas; developing one idea goes to method-brainstorm.datagobashVotes: 0GitHub stars: 3
Method Language DetectADetects R, Python, or mixed-language signals in repo files and emits a language handoff. Use when a skill needs language evidence or the user asks the repo's stack.datapythongitVotes: 0GitHub stars: 3
Method Lit SearchARoutes a literature request to PubMed, full-text evidence mapping, or authoritative web sources. Use when the user broadly asks for papers or evidence.researchdatabasedocumentationVotes: 0GitHub stars: 3
Method MarimoACreates, edits, validates, and reviews marimo reactive Python notebooks (UI widgets, PEP 723, export). Use when working on a marimo notebook; Jupyter edits go to method-notebook-edit.datapythongoVotes: 0GitHub stars: 3
Method Meta AnalysisAPools literature effects with REML/Hartung-Knapp. Use when power or a SAP needs a cited effect-size assumption and sensitivity range.datapythonrustVotes: 0GitHub stars: 3
Method Ml TrackAAdds reproducible ML experiment tracking (data hashes, splits, metrics, SAP links) with MLflow, W&B, DVC, or an offline log. Use when building or reviewing ML experiments.datapythongoVotes: 0GitHub stars: 3
Method Model CardAGenerates a clinical model card: intended use, data, performance with intervals, calibration, fairness, limits. Use when the user asks for a model card.dataperformancedocumentationVotes: 0GitHub stars: 3
Method Model ChoiceAChooses and justifies the statistical model (regression, mixed/GEE, survival, causal, prediction, Bayesian) after the estimand is set. Use when the user asks which model to fit.datapythongitVotes: 0GitHub stars: 3
Method Notebook EditAEdits existing Jupyter .ipynb notebooks with cell anchors, backups, and metadata-preserving writes. Use when the user asks to patch an existing .ipynb.datapythonbashVotes: 0GitHub stars: 3
Method Notebook StandardsASets the structure and documentation contract for new or extended marimo, Jupyter, R Markdown, and Quarto notebooks. Use when creating notebook cells or chunks.datadocumentationVotes: 0GitHub stars: 3
Method NumbersALocks manuscript numbers to an analysis-written registry; a fail-closed gate traces each to its SAP output, script commit, and source hash. Use when reporting or checking results.datapythongoVotes: 0GitHub stars: 3
Method Omics QcARuns sequencing and omics QA: FASTQ, BAM/CRAM, VCF, count matrices, methylation arrays, sample swaps, batch confounding. Use when omics data needs QC before analysis.datagoexpressVotes: 0GitHub stars: 3
Method OptimizeARuns bounded, metric-scored experiment loops to improve a model, prompt, or pipeline without touching the test set. Use when a scored metric must improve; broken runs go to method-debug.datapythonrustVotes: 0GitHub stars: 3
Method PhenotypeAValidates a computable phenotype against chart review: 2x2 table, PPV, NPV, sensitivity, specificity, Wilson intervals. Use when checking a phenotype or code list.datapythonrustVotes: 0GitHub stars: 3
Method PlanACreates the durable plan for data-science work: an implementation plan or, for studies, a statistical analysis plan (SAP). Use when the user asks to plan work or write a SAP.datagogitVotes: 0GitHub stars: 3
Method PowerACalculates sample size and power for clinical, survival, cluster, and prediction-model studies, with a script, sweep, and SAP text. Use when the user asks for power or sample size.datapythonbashVotes: 0GitHub stars: 3
Method PrACommits, pushes, and opens or updates a pull request with a value-first body, keeping data and PHI out. Use when the user asks to ship or open a PR.datagoshellVotes: 0GitHub stars: 3
Method PreregAGenerates preregistration and registry content for OSF, ClinicalTrials.gov, PROSPERO, or a study protocol. Use when the user asks to preregister or register a study.datapythongoVotes: 0GitHub stars: 3
Method PresubmitARuns the final gate on a manuscript, abstract, cover letter, or grant: section discipline, voice, and anti-slop passes. Use when a draft is about to go to co-authors.datagoVotes: 0GitHub stars: 3
Method PubmedASearches PubMed/MEDLINE via E-utilities with MeSH-aware queries into a PMID and abstract CSV. Use when the user explicitly wants PubMed or PMIDs; broad asks go to method-lit-search.datapythongoVotes: 0GitHub stars: 3
Method QuestionATurns one chosen biomedical study idea into PICO, FINER, a hypothesis, and PubMed-query YAML. Use when the user wants PICO/FINER framing; open design exploration goes to method-brainstorm.datagoVotes: 0GitHub stars: 3
Method RARoutes R work: analysis design, tidyverse, event-study DiD, packages, testthat, CRAN, profiling, targets. Use when a project is R-first or the user needs R help; diffs and PRs go to method-review.datagorailsVotes: 0GitHub stars: 3
Method Release NotesASummarizes recent methodsmith plugin releases from release metadata. Use when the user asks what changed in the plugin or whether a skill shipped.datapythonrustVotes: 0GitHub stars: 3
Method Report BugACollects a reproducible methodsmith plugin bug report and files or drafts a GitHub issue. Use when the user wants to report a plugin bug.datagobashVotes: 0GitHub stars: 3
Method Resolve FeedbackAResolves review feedback on analysis or code PRs, methodology comments included: triages, fixes, validates, replies. Use when the user asks to address PR comments.datapythonrustVotes: 0GitHub stars: 3
Method ReviewAReviews data-science code changes with statistical, methods, PHI, and engineering personas and confidence-gated findings. Use when the user asks for code or PR review.datagotestingVotes: 0GitHub stars: 3

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