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Claude Skills by PangenomeAI
github.com/PangenomeAI41 skills0 installs78 views
- Agri Deep ResearchDeep research producing a fully written, source-validated literature review on an agricultural question, as a senior agricultural scientist of the relevant discipline: scope, design the method, discover and screen by journal ranking, validate every source, extract and verify evidence, synthesize, stress-test, then write and format the review through an editorial and integrity loop. Same 12-subagent machinery as food-deep-research, grounded in agriculture and multidisciplinary literature (Q1/Q...Votes: 0GitHub stars: 28
- Agri PaperMulti-subagent manuscript system for agricultural science, written as a senior agricultural scientist of the relevant discipline: understand the field, frame questions, curate data, run statistics, build figures and tables, construct the discussion, draft, polish, and self-review — journal-aware throughout. Same machinery as food-paper, grounded in agriculture literature (Q1/Q2 preferred, Q4 avoided) and agricultural reporting standards for field trials, animal work and soils. Includes a form...Votes: 0GitHub stars: 28
- Agri PipelineMaster orchestrator for the whole agricultural research-to-publication workflow, run as a senior agricultural scientist. Coordinates the agri skills — journal selection, research (agri-research or agri-deep-research), writing and analysis (agri-paper), figures (food-figure), peer review (agri-review), revision and finalization — into one governed path with quality gates. Same machinery as food-pipeline, grounded in agriculture and multidisciplinary literature (Q1/Q2 preferred, Q4 avoided). Us...Votes: 0GitHub stars: 28
- Agri PptTurn an agricultural-science review report, evidence brief, or manuscript into a fully EDITABLE PowerPoint (.pptx) — every title, bullet, table, and figure a native editable object, nothing flattened to an image. Same machinery as food-ppt, but for agricultural work: converts the outputs of agri-research, agri-deep-research, agri-paper, and agri-pipeline (or any Word/PDF/Markdown/txt source) into a well-designed, grounded slide deck with presenter notes on every slide. Never invents content b...Votes: 0GitHub stars: 28
- Agri ResearchRun a comprehensive, multi-source literature and evidence-synthesis workflow for agricultural science, as a senior agricultural scientist of the relevant discipline (agronomy, soil science, horticulture, dairy and animal science, agricultural engineering, or agricultural economics). Same machinery as food-research, but the evidence base is agriculture and multidisciplinary literature ranked by journal quartile: Q1/Q2 agriculture journals plus the Nature, Science, Cell and PNAS families first,...Votes: 0GitHub stars: 28
- Agri ReviewMulti-reviewer peer-review system for agricultural manuscripts. Simulates an editorial panel — a coordinating editor, three domain reviewers (methodology, domain/novelty, integrity/ethics) and a devil's advocate — plus a formatting check against the target journal, all acting as senior agricultural scientists. Same machinery as food-review, including the knowledge_builder that reads the cited sources and key field literature first, grounded in agriculture literature (Q1/Q2 preferred, Q4 avoid...Votes: 0GitHub stars: 28
- Food Deep ResearchGeneral-purpose deep research that produces a fully written, source-validated literature review on any question: scope it, design the method, discover and screen sources by journal ranking, validate every source, extract and verify evidence, synthesize, stress-test, then write and format the review (APA 7.0 by default, or a target journal's style) and polish it through an editorial + integrity review loop. Use standalone for a deep dive or literature review, or as the deep-dive engine called ...Votes: 0GitHub stars: 28
- Food FetchLawfully acquire the full text of academic articles so the research and review skills can read papers, not just abstracts. Routes each article through legal open access (Unpaywall/OpenAlex/PMC/arXiv), the user's own reference-manager library (EndNote/Zotero/Mendeley PDFs), and — only with the user's own logged-in institutional browser session — their library's entitled full text, then extracts the text and writes a manifest of what was and was not obtained. Open-access articles are always dow...Votes: 0GitHub stars: 28
- Food FigureComprehensive figure system for food & nutrition manuscripts: analyzes the user's data, recommends the best figure(s) to make, then produces submission-grade graphics in Python or R at the target journal's spec. Handles all common scientific figure types (bar/box/violin, line/kinetic, scatter/regression, Bland–Altman, radar/sensory, chromatograms, TPA/rheology, dose–response, survival, PCA/PLS-DA, heatmaps/clustering, forest, microscopy plates, multi-panel). Use to make, create, design, revis...Votes: 0GitHub stars: 28
- Food PaperMulti-subagent manuscript system for food & nutrition science covering the whole research process: understand the field, frame research questions, curate and analyze data, run statistics, build figures and tables, construct the discussion, draft, polish, and self-review — journal-aware throughout. Includes a format-convert mode that reformats an already-finished manuscript to another journal's structure and reference style without touching the science. Use to write, outline, revise, polish, o...Votes: 0GitHub stars: 28
- Food PipelineMaster orchestrator for the whole food & nutrition research-to-publication workflow. Coordinates the specialist skills — each with its own subagent set — into one governed path: journal selection, research (food-research / food-deep-research), writing & analysis (food-paper), figures (food-figure), peer review (food-review), revision, and finalization. Use when the user wants the entire process managed end to end, or a project routed to the right skills with quality gates. Triggers: run the f...Votes: 0GitHub stars: 28
- Food PptTurn a food & nutrition review report, evidence brief, or manuscript into a fully EDITABLE PowerPoint (.pptx) that opens in PowerPoint / Keynote / Google Slides with every title, bullet, table, and figure as a native editable object — nothing flattened to an image. Converts the outputs of food-research, food-deep-research, food-paper, and food-pipeline (or any Word/PDF/Markdown/txt source) into a well-designed deck: it plans the outline, writes concise grounded slide text with presenter notes...Votes: 0GitHub stars: 28
- Food ProposalMaster orchestrator for preparing research proposals and funding-application proposals in food, nutrition & agricultural science. Like food-pipeline, but for proposals: it resolves the target funding scheme's format first (headings, order, page/word limit, font, assessment criteria), then drafts from scratch (food-deep-research for the knowledge base, food-paper to write, food-review to review) or revises an existing draft after first understanding the field. Enforces the scheme's length limi...Votes: 0GitHub stars: 28
- Food ResearchRun a comprehensive, multi-source literature and evidence-synthesis workflow for food & nutrition science. Use when the user wants to research a food/nutrition topic in depth, do a literature review, build an evidence brief, screen and synthesize many sources, verify citations, or scope a systematic review. Coordinates food-science databases, preprints, semantic search, and food-safety/regulatory sources; runs a four-layer search, two-phase screening, and cross-source synthesis via subagents;...Votes: 0GitHub stars: 28
- Food ReviewMulti-reviewer peer-review system for food & nutrition manuscripts. Simulates an editorial panel — a coordinating editor, three domain reviewers (methodology/statistics, domain/novelty, integrity/ethics), and a devil's advocate — plus a formatting-compliance check against the target journal (APA 7.0 by default, or a specific journal via journal-selector). Grounds the panel first: reads the manuscript's cited sources and the field's key literature into a knowledge base, so novelty and correctn...Votes: 0GitHub stars: 28
- Journal SelectorResolve a target food/nutrition journal to its author-guideline skill and formatting constraints. Use at the start of writing, formatting, or submission-prep for a food-science paper, and whenever the user names a journal they want to publish in or format their manuscript for, to load that journal's rules (word/abstract limits, structure, reference/citation style, figure spec). Triggers: which journal, target journal, publish on a journal, publish in a journal, I want to publish on Food Chemi...Votes: 0GitHub stars: 28
- Agri Food SecurityAuthor-guideline skill for Agriculture & Food Security (BMC / Springer Nature, open access). Use to format or check a manuscript for this BMC journal — structure, mandatory BMC declarations, numbered references, and figure specs. Triggers: submit to Agriculture & Food Security, BMC food journal guidelines, BMC declarations formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Agri OtherAuthor-guideline skill for Q1/Q2 agriculture journals from society, academy, and regional publishers not covered by a dedicated publisher skill: Soil (Copernicus), Plant Soil and Environment / Czech Journal of Animal Science (Czech Academy of Agricultural Sciences), CABI titles, Crop and Pasture Science (CSIRO), Animal Bioscience (AAAP), Journal of Animal Science and Technology (KSAST), Australian Journal of Grape and Wine Research (IVES), Am. J. Enology and Viticulture, Seed Science and Tech...Votes: 0GitHub stars: 28
- Annu Rev FoodAuthor-guideline skill for Annual Review of Food Science and Technology (Annual Reviews, ISSN 1941-1413). Use to format or check an invited review for this journal — review structure, author–date Annual Reviews references, and figure specs. Triggers: submit to Annual Review of Food Science and Technology, Annual Reviews guidelines, invited food review formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- British Food JournalAuthor-guideline skill for British Food Journal (Emerald, ISSN 0007-070X). Use to format or check a manuscript for BFJ — Emerald's required structured abstract, article classification, Harvard references, and figure specs. Triggers: submit to British Food Journal, Emerald food journal guidelines, structured abstract for BFJ. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Cambridge NutritionShared author-guideline skill for Cambridge University Press nutrition journals: British Journal of Nutrition, Nutrition Research Reviews, Proceedings of the Nutrition Society, Public Health Nutrition, Journal of Nutritional Science. Use to format or check a manuscript for a Cambridge nutrition journal — structure, structured abstracts, Harvard references, and figure specs. Triggers: submit to British Journal of Nutrition, Nutrition Research Reviews, Proceedings of the Nutrition Society guide...Votes: 0GitHub stars: 28
- Cell PressShared author-guideline skill for Cell Press journals that food & nutrition researchers publish in: Cell, Cell Metabolism, Cell Host & Microbe, Molecular Cell, Immunity, Current Biology, Cell Reports Medicine, One Earth, Joule, Matter, Chem. Use to format or check a manuscript for a Cell Press journal — structure with STAR Methods, abstract + eTOC blurb, Cell Press reference style, and figure specs. Triggers: submit to Cell, Cell Metabolism, Cell Host & Microbe guidelines, Cell Press formatti...Votes: 0GitHub stars: 28
- Crit Rev FoodShared author-guideline skill for Taylor & Francis food journals: Critical Reviews in Food Science and Nutrition, Food Reviews International, International Journal of Food Properties. Use to format or check a manuscript for a T&F food journal — structure, abstract/keyword limits, Taylor & Francis reference styles, and figure specs. Triggers: submit to Critical Reviews in Food Science and Nutrition, Food Reviews International, IJFP guidelines, Taylor & Francis food formatting. Also fires when ...Votes: 0GitHub stars: 28
- Elsevier FoodShared author-guideline skill for Elsevier food-science journals (Trends in Food Science & Technology, Food Hydrocolloids, LWT, Food Research International, Food Control, Meat Science, Food Policy, Postharvest Biology & Technology, and ~20 more). Use to format or check a manuscript for any Elsevier food journal not covered by its own skill. Covers the common Elsevier Guide-for-Authors structure, Highlights, graphical abstract, reference styles, and figure specs. Triggers: submit to an Elsevie...Votes: 0GitHub stars: 28
- Food ChemistryAuthor-guideline skill for Food Chemistry (Elsevier, ISSN 0308-8146). Use when preparing, formatting, or checking a manuscript for submission to Food Chemistry — structure, word/abstract limits, Highlights, graphical abstract, Elsevier numbered (Vancouver) references, and figure specs. Triggers: submit to Food Chemistry, Food Chem guidelines, format for Food Chemistry. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Food FunctionShared author-guideline skill for Royal Society of Chemistry food journals: Food & Function and Sustainable Food Technology. Use to format or check a manuscript for an RSC food journal — article types, structure, RSC superscript-numbered references, and figure specs. Triggers: submit to Food & Function, Sustainable Food Technology guidelines, RSC food formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Food Quality SafetyAuthor-guideline skill for Food Quality and Safety (Oxford University Press, ISSN 2399-1399). Use to format or check a manuscript for this open-access OUP journal — structure, abstract/keyword limits, reference style, and figure specs. Triggers: submit to Food Quality and Safety, OUP food journal guidelines. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Foods MdpiShared author-guideline skill for MDPI food & nutrition journals: Foods, Antioxidants, Toxins. Use to format or check a manuscript for an MDPI food journal — the MDPI template structure, abstract/keyword limits, numbered MDPI/ACS-style references, and figure specs. Triggers: submit to Foods, Antioxidants, Toxins guidelines, MDPI food formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Frontiers NutritionShared author-guideline skill for Frontiers Media food & nutrition journals: Frontiers in Nutrition and Frontiers in Sustainable Food Systems. Use to format or check a manuscript for a Frontiers journal — article types, structure, Frontiers reference style, and figure specs. Triggers: submit to Frontiers in Nutrition, Frontiers in Sustainable Food Systems guidelines, Frontiers formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its re...Votes: 0GitHub stars: 28
- J Dairy ScienceAuthor-guideline skill for Journal of Dairy Science (Elsevier on behalf of ADSA, ISSN 0022-0302). Use to format or check a manuscript for JDS — its distinct interpretive summary, section structure, author–date references, and figure specs differ from generic Elsevier journals. Triggers: submit to Journal of Dairy Science, JDS guidelines, ADSA formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- J Future FoodsShared author-guideline skill for KeAi/Tsinghua open-access food journals hosted on ScienceDirect: Journal of Future Foods (KeAi) and Food Science and Human Wellness (KeAi/Tsinghua). Use to format or check a manuscript for these journals — Elsevier-style structure, numbered references, and figure specs. Triggers: submit to Journal of Future Foods, Food Science and Human Wellness guidelines, KeAi food formatting. Also fires when the user wants to publish on/in this journal, format a manuscript...Votes: 0GitHub stars: 28
- JafcAuthor-guideline skill for Journal of Agricultural and Food Chemistry (ACS, ISSN 0021-8561). Use to format or check a manuscript for JAFC — ACS structure, TOC/abstract graphic, ACS reference style, and figure specs. Triggers: submit to Journal of Agricultural and Food Chemistry, JAFC guidelines, ACS food chemistry formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- MultidisciplinaryAuthor-guideline skill for multidisciplinary and cross-discipline journals that food & nutrition researchers publish in but which sit outside the food/nutrition JCR categories: eLife, PLOS Biology, PLOS Medicine, National Science Review, The Innovation, Environmental Science & Technology (food safety/contaminants), Gut and Gastroenterology (nutrition/GI), Diabetes Care (clinical nutrition), and The ISME Journal (food/gut microbial ecology). Use to format or check a manuscript for one of these...Votes: 0GitHub stars: 28
- Nature FoodAuthor-guideline skill for Nature Portfolio food journals: Nature Food and npj Science of Food. Use to format or check a manuscript for these journals — strict article-type word limits, unreferenced short abstracts, Nature superscript-numbered references, display-item limits, and Methods placement. Triggers: submit to Nature Food, npj Science of Food guidelines, Nature Portfolio food formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match...Votes: 0GitHub stars: 28
- Nature PortfolioShared author-guideline skill for Nature Portfolio research journals that food & nutrition researchers publish in: Nature, Nature Communications, Nature Microbiology, Nature Metabolism, Nature Sustainability, Nature Biotechnology, Nature Medicine, and Nature Reviews titles. Use to format or check a manuscript for a Nature-family journal — strict article-type word limits, unreferenced short abstracts, Nature superscript-numbered references (article titles required), display-item limits, Method...Votes: 0GitHub stars: 28
- Nutrition OtherAuthor-guideline skill for nutrition journals from smaller/niche publishers not covered by a dedicated publisher skill: Obesity Facts (Karger), Current Opinion in Clinical Nutrition and Metabolic Care (Wolters Kluwer/Lippincott), Hepatobiliary Surgery and Nutrition (AME), Beneficial Microbes (Brill), Food & Nutrition Research (Swedish Nutrition Foundation). Use to format or check a manuscript for one of these — with the journal's source URL and default guidance. Triggers: submit to Obesity Fa...Votes: 0GitHub stars: 28
- PnasAuthor-guideline skill for PNAS (Proceedings of the National Academy of Sciences), a multidisciplinary journal food & nutrition researchers publish in. Use to format or check a manuscript for PNAS — structure, mandatory Significance Statement, abstract limit, PNAS numbered references, and figure specs. Triggers: submit to PNAS, Proceedings of the National Academy of Sciences guidelines, PNAS formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, ...Votes: 0GitHub stars: 28
- Qas Crops FoodsAuthor-guideline skill for Quality Assurance and Safety of Crops & Foods (Codon Publications, ISSN 1757-8361). Use to format or check a manuscript for this open-access journal — structure, numbered references, and figure specs. Triggers: submit to Quality Assurance and Safety of Crops & Foods, Codon Publications food guidelines, QAS Crops Foods formatting. Also fires when the user wants to publish on/in this journal, format a manuscript for it, or match its reference/citation style.Votes: 0GitHub stars: 28
- Science AaasAuthor-guideline skill for the AAAS Science family that food & nutrition researchers publish in: Science, Science Advances, Science Translational Medicine, Science Immunology, Science Signaling, Science Robotics. Use to format or check a manuscript for a Science-family journal — very tight length limits, short abstract, Science numbered reference style, and figure specs. Triggers: submit to Science, Science Advances guidelines, AAAS Science formatting. Also fires when the user wants to publis...Votes: 0GitHub stars: 28
- Springer FoodShared author-guideline skill for Springer / Springer Nature food journals: Food Engineering Reviews, Food and Bioprocess Technology, Food Security, and the SpringerOpen journal Food Production Processing and Nutrition. Use to format or check a manuscript for a Springer food journal — structure, abstract/keyword limits, Springer reference styles, and figure specs. Triggers: submit to Food and Bioprocess Technology, Food Security, Food Engineering Reviews guidelines, Springer food formatting. ...Votes: 0GitHub stars: 28
- Wiley FoodShared author-guideline skill for Wiley food & nutrition journals: Comprehensive Reviews in Food Science and Food Safety, Food Frontiers, eFood, Legume Science, Food and Energy Security, Molecular Nutrition & Food Research, Journal of Food Biochemistry, Food Science & Nutrition. Use to format or check a manuscript for a Wiley food journal — structure, abstract/keyword limits, Wiley reference styles, and figure specs. Triggers: submit to a Wiley food journal, CRFSFS/Food Frontiers/Food Science...Votes: 0GitHub stars: 28