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Claude Skills by majiayu000
github.com/majiayu00015,497 skills907 installs34,333 views
- Scrnaseq Pipeline Gptomics Bioskills 2End-to-end single-cell RNA-seq workflow from 10X Genomics data to annotated cell types. Covers QC, normalization, clustering, marker detection, and cell type annotation. Use when analyzing single-cell RNA-seq data.Votes: 0GitHub stars: 666
- Scvelo K Dense Ai Scientific Agent Ski 2RNA velocity analysis with scVelo. Estimate cell state transitions from unspliced/spliced mRNA dynamics, infer trajectory directions, compute latent time, and identify driver genes in single-cell RNA-seq data. Complements Scanpy/scVI-tools for trajectory inference.Votes: 0GitHub stars: 666
- Scvi Tools K Dense Ai Scientific Agent Ski 2Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with uncertainty, or multi-modal integration (TOTALVI, MultiVI). Best for advanced modeling, batch effects, multimodal data. For standard analysis pipelines use scanpy.Votes: 0GitHub stars: 666
- Segal TypesSegal types for synthetic ∞-categories. Binary composites exist uniquelyVotes: 0GitHub stars: 666
- Self Nn TorchGeneral SOP for common requests related to self, nn, torch.Votes: 0GitHub stars: 666
- Semantic Search SetupSetup vector embeddings and semantic search for document collections. Use for AI-powered similarity search, finding related documents, and preparing knowledge bases for RAG systems.Votes: 0GitHub stars: 666
- Senior Data Scientist Eyh0602 SkillshubWorld-class data science skill for statistical modeling, experimentation, causal inference, and advanced analytics. Expertise in Python (NumPy, Pandas, Scikit-learn), R, SQL, statistical methods, A/B testing, time series, and business intelligence. Includes experiment design, feature engineering, model evaluation, and stakeholder communication. Use when designing experiments, building predictive models, performing causal analysis, or driving data-driven decisions.Votes: 0GitHub stars: 666
- Senior Data ScientistWorld-class data science skill for statistical modeling, experimentation, causal inference, and advanced analytics. Expertise in Python (NumPy, Pandas, Scikit-learn), R, SQL, statistical methods, A/B testing, time series, and business intelligence. Includes experiment design, feature engineering, model evaluation, and stakeholder communication. Use when designing experiments, building predictive models, performing causal analysis, or driving data-driven decisions.Votes: 0GitHub stars: 666
- Senior Ml Engineer Hainamchung Agent AssistantWorld-class ML engineering skill for productionizing ML models, MLOps, and building scalable ML systems. Expertise in PyTorch, TensorFlow, model deployment, feature stores, model monitoring, and ML infrastructure. Includes LLM integration, fine-tuning, RAG systems, and agentic AI. Use when deploying ML models, building ML platforms, implementing MLOps, or integrating LLMs into production systems.Votes: 0GitHub stars: 666
- Senior Ml EngineerWorld-class ML engineering skill for productionizing ML models, MLOps, and building scalable ML systems. Expertise in PyTorch, TensorFlow, model deployment, feature stores, model monitoring, and ML infrastructure. Includes LLM integration, fine-tuning, RAG systems, and agentic AI. Use when deploying ML models, building ML platforms, implementing MLOps, or integrating LLMs into production systems.Votes: 0GitHub stars: 666
- Sensor Fusion A5c Ai Babysitter 2Expert skill for multi-sensor fusion and state estimation using Kalman filtering. Implement EKF/UKF, configure robot_localization, fuse IMU, GPS, odometry, and visual sensors for robust localization.Votes: 0GitHub stars: 666
- Sensor Fusion Alphaonedev Openclaw GraphCombining IoT sensor data using algorithms like Kalman filters for improved accuracy and reliabilityVotes: 0GitHub stars: 666
- Sensor Fusion Lidar PointcloudThis skill covers the implementation of core software systems for autonomousVotes: 0GitHub stars: 666
- Seq Objects Gptomics BioskillsCreate and manipulate Seq, MutableSeq, and SeqRecord objects using Biopython. Use when creating sequences from strings, modifying sequence data in-place, or building annotated sequence records.Votes: 0GitHub stars: 666
- Serverless Modal Wanshuiyin Auto Claude Code ResRun GPU workloads on Modal — training, fine-tuning, inference, batch processing. Zero-config serverless: no SSH, no Docker, auto scale-to-zero. Use when user says \"modal run\", \"modal training\", \"modal inference\", \"deploy to modal\", \"need a GPU\", \"run on modal\", \"serverless GPU\", or needs remote GPU compute.Votes: 0GitHub stars: 666
- Serverless ModalRun GPU workloads on Modal — training, fine-tuning, inference, batch processing. Zero-config serverless: no SSH, no Docker, auto scale-to-zero. Use when user says \"modal run\", \"modal training\", \"modal inference\", \"deploy to modal\", \"need a GPU\", \"run on modal\", \"serverless GPU\", or needs remote GPU compute.Votes: 0GitHub stars: 666
- Seuratclustering Pwwang Immunopipe 750e0e96Performs unsupervised clustering on single-cell RNA-seq data using Seurat. This process finds nearest neighbors, computes UMAP for visualization, and applies Louvain/Leiden algorithms to identify cell clusters. Clusters can be explored at multiple resolutions to balance granularity and biological relevance.Votes: 0GitHub stars: 666
- Seuratpreparing Pwwang Immunopipe 70d7517aLoad, prepare, and apply quality control (QC) to single-cell RNA-seq data using Seurat. Performs data loading, QC filtering, normalization, and multi-sample integration. This is a core preprocessing process that prepares Seurat objects for downstream clustering and analysis.Votes: 0GitHub stars: 666
- Seuratsubclustering Pwwang Immunopipe 17edbf91Performs fine-grained re-clustering on specific subsets of cells (e.g., individual clusters, cell types, or custom subsets). Unlike `Seurat::FindSubCluster` which only finds subclusters within a single cluster, this process performs the complete clustering workflow (PCA, UMAP, FindNeighbors, FindClusters) on any subset of cells defined by metadata filters or cell barcode lists.Votes: 0GitHub stars: 666
- SftSupervised Fine-Tuning with SFTTrainer and Unsloth. Covers dataset preparation, chat template formatting, training configuration, and Unsloth optimizations for 2x faster instruction tuning. Includes thinking model patterns.Votes: 0GitHub stars: 666
- Shap K Dense Ai Scientific Agent Ski 2Model interpretability and explainability using SHAP (SHapley Additive exPlanations). Use this skill when explaining machine learning model predictions, computing feature importance, generating SHAP plots (waterfall, beeswarm, bar, scatter, force, heatmap), debugging models, analyzing model bias or fairness, comparing models, or implementing explainable AI. Works with tree-based models (XGBoost, LightGBM, Random Forest), deep learning (TensorFlow, PyTorch), linear models, and any black-box mo...Votes: 0GitHub stars: 666
- SicmutilsSICMUtils/Emmy - Clojure library for symbolic mathematics, automatic differentiation, and classical mechanics. Bridges SICM concepts to executable computation via SRFI-compatible abstractions.Votes: 0GitHub stars: 666
- SigregSketched Isotropic Gaussian Regularization primitive. Scalar loss matching the embedding distribution to a standard-normal target via Cramér-Wold slicing and the Epps-Pulley empirical characteristic function test. Port of rbalestr-lab/lejepa (MIT). Default-off in v1.49.571.Votes: 0GitHub stars: 666
- Similarity Search Patterns Tringo0108 Z CommandImplement efficient similarity search with vector databases. Use when building semantic search, implementing nearest neighbor queries, or optimizing retrieval performance.Votes: 0GitHub stars: 666
- Simo Multiomics Integration Agent---name: simo-multiomics-integration-agentVotes: 0GitHub stars: 666
- Single Cell Rna Qc Mdbabumiamssm Llms Universal Life 2bf71998Execute the MAD-based single-cell RNA-seq QC workflow (scripts + Python API) to filter low-quality cells and emit reports plus filtered AnnData files.Votes: 0GitHub stars: 666
- Skills Skilldoai Skilldo 10Multi-backend deep learning library for building, training, running inference, and saving neural network models in Python.Votes: 0GitHub stars: 666
- Skills Skilldoai Skilldo 12python libraryVotes: 0GitHub stars: 666
- Skills Skilldoai Skilldo 15Machine learning library for classical supervised/unsupervised models, preprocessing, and model evaluation using NumPy/SciPy.Votes: 0GitHub stars: 666
- Skills Skilldoai Skilldo 16N-dimensional array computing library providing array types, vectorized operations, linear algebra, FFT, random sampling, and testing utilities.Votes: 0GitHub stars: 666
- Skills Skilldoai Skilldo 2python libraryVotes: 0GitHub stars: 666
- Smolvlm Tdimino Claude Code MinoanLocal vision-language model for image analysis using SmolVLM-2BVotes: 0GitHub stars: 666
- Smv Model ExtractorAutomatically extract abstract finite-state models in SMV/NuSMV format from source code (C/C++, Java, Python) for formal model checking. Use when users need to: (1) Generate SMV models from program code for verification, (2) Extract state-transition models from protocol implementations, (3) Analyze control flow and data flow to construct formal models, (4) Create models for checking safety and liveness properties, (5) Convert imperative code to declarative state machines. Particularly effecti...Votes: 0GitHub stars: 666
- Soliton DetectionTopological soliton detection and agency bridge with anyonic fusion algebra for concept compositionVotes: 0GitHub stars: 666
- SpacyspaCy NLP library with pipelines. Use for text processing.Votes: 0GitHub stars: 666
- Spatial AgentSpatialAgent focuses on the biological interpretation of spatial transcriptomicsVotes: 0GitHub stars: 666
- Spatial Epigenomics Agent---name: spatial-epigenomics-agentVotes: 0GitHub stars: 666
- Speak Emzod Speak 2Give your agent the ability to speak to you real-time. Talk to your Claude! Local TTS, text-to-speech, voice synthesis, audio generation with voice cloning on Apple Silicon. Use for reading articles aloud, audiobook narration, or voice responses. Runs entirely on-device via MLX - private, no API keys.Votes: 0GitHub stars: 666
- Speak Response Tdimino Claude Code MinoanVocalize Claude's last response using local Qwen3-TTS. Default voice is the Oracle (deep, resonant Dune narrator). Use --preset for emotion-controlled preset speakers.Votes: 0GitHub stars: 666
- Speaker DiarizationAdvanced speaker diarization using pyannote-audio. Identify who speaks when, detect multiple speakers, handle overlapping speech, and create speaker-specific segments. Use when you need accurate speaker identification, multi-speaker content analysis, or speaker-specific clip extraction. More accurate than Gemini's built-in diarization for complex scenarios.Votes: 0GitHub stars: 666
- Specialized ActionsExplains specialized Synapse action classes for specific workflows. Use when the user mentions "BaseTrainAction", "BaseExportAction", "BaseUploadAction", "BaseInferenceAction", "BaseDeploymentAction", "AddTaskDataAction", "train action", "export action", "upload action", "inference action", "deployment action", "pre-annotation", "add_task_data", "autolog", "get_dataset", "create_model", or needs workflow-specific action development help.Votes: 0GitHub stars: 666
- Spectroscopy'Skills for computing spectroscopic observables from first principles:Votes: 0GitHub stars: 666
- Speech Pathology Ai Curiositech Windags SkillsExpert speech-language pathologist specializing in AI-powered speech therapy, phoneme analysis, articulation visualization, voice disorders, fluency intervention, and assistive communication technology. Activate on 'speech therapy', 'articulation', 'phoneme analysis', 'voice disorder', 'fluency', 'stuttering', 'AAC', 'pronunciation', 'speech recognition', 'mellifluo.us'. NOT for general audio processing, music production, or voice acting coaching without clinical context.Votes: 0GitHub stars: 666
- Splitting Datasets Foryourhealth111 Pix Vibe SkillsSplit datasets into training, validation, and test partitions with the right stratification and temporal rules. Use as a narrow preprocessing helper once the broader ML workflow is already chosen, not as the main route owner for an end-to-end ML task.Votes: 0GitHub stars: 666
- StabilityQualitative behavior of solutions near equilibriaVotes: 0GitHub stars: 666
- Stable Baselines3 K Dense Ai Scientific Agent Ski 2Production-ready reinforcement learning algorithms (PPO, SAC, DQN, TD3, DDPG, A2C) with scikit-learn-like API. Use for standard RL experiments, quick prototyping, and well-documented algorithm implementations. Best for single-agent RL with Gymnasium environments. For high-performance parallel training, multi-agent systems, or custom vectorized environments, use pufferlib instead.Votes: 0GitHub stars: 666
- Stable ManifoldManifold of points converging to equilibriumVotes: 0GitHub stars: 666
- Stellogen Plurigrid Asi 4980a629Stellogen SkillVotes: 0GitHub stars: 666
- StellogenStellogen SkillVotes: 0GitHub stars: 666
- Structured DecompStructuredDecompositions.jl sheaves on tree decompositions for FPT algorithms with bidirectional navigationVotes: 0GitHub stars: 666