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Claude Skills by majiayu000
github.com/majiayu00015,497 skills907 installs34,333 views
- MetabolicpathwayactivityCalculates pathway activity scores for metabolic pathways across different cell groups and subsets. This process quantifies the metabolic activity of each pathway per group, generating visualizations (heatmaps and violin plots) to compare metabolic states between clusters or conditions. Based on the methodology from Xiao et al.Votes: 0GitHub stars: 666
- Ml Engineer Brunolimaff Jpg Novo App- Working on ml engineer tasks or workflows - Needing guidance, best practices, or checklists for ml engineerVotes: 0GitHub stars: 666
- Ml Engineer SkillExpert in building scalable ML systems, from data pipelines and model training to production deployment and monitoring.Votes: 0GitHub stars: 666
- Mlflow EvaluationMLflow 3 GenAI evaluation for agent development. Use when (1) writing mlflow.genai.evaluate() code, (2) creating @scorer functions, (3) building evaluation datasets from traces, (4) using built-in scorers (Guidelines, Correctness, Safety, RetrievalGroundedness), (5) analyzing traces for latency/errors/architecture, (6) optimizing agent context/prompts/token usage, (7) debugging evaluation failures. Covers the full eval workflow: trace analysis -> dataset building -> scorer creation -> evaluat...Votes: 0GitHub stars: 666
- Mlflow Housegarofalo Claude Code BaseML lifecycle management with MLflow. Track experiments, package models, manage registries, and deploy models. Use for ML operations, experiment tracking, and model deployment.Votes: 0GitHub stars: 666
- Mlops Engineer Brunolimaff Jpg Novo App- Working on mlops engineer tasks or workflows - Needing guidance, best practices, or checklists for mlops engineerVotes: 0GitHub stars: 666
- Moai Domain Data Science"Production-grade data science specialist with TensorFlow 2.20.0, PyTorch\Votes: 0GitHub stars: 666
- Moai Ml Llm Fine TuningEnterprise LLM Fine-Tuning with LoRA, QLoRA, and PEFT techniquesVotes: 0GitHub stars: 666
- Moai Ml RagRetrieval-Augmented Generation systems, vector databases, embedding strategies, and production RAG architectures for enterprise LLM applications. Use when building RAG, semantic search, or knowledge-aware AI systems.Votes: 0GitHub stars: 666
- Model Evaluation BenchmarkAutomated reproduction of comprehensive model evaluation benchmarks following the Benchmark Suite V3. Auto-activates for model benchmarking, comparison evaluation, or performance testing between AI models.Votes: 0GitHub stars: 666
- Multimodal IntegrationAnalyze multi-modal single-cell data (CITE-seq, Multiome, spatial). Use when working with data that measures multiple modalities per cell like RNA + protein or RNA + ATAC. Use when analyzing CITE-seq, Multiome, or other multi-modal single-cell data.Votes: 0GitHub stars: 666
- Nano Banana Pro Joeyjoziah Investment AnalysisGenerate or edit images via Gemini 3 Pro Image (Nano Banana Pro).Votes: 0GitHub stars: 666
- Nanobanana BaseStudioJinsei用Nanobanana画像生成Skill。Google Gemini APIを使用してロゴ、コトネちゃん、サイトビジュアル等を生成します。Votes: 0GitHub stars: 666
- Nanobanana ProGenerate images using Google Gemini NanoBanana via browser automation. Use this skill for general-purpose AI image generation from text prompts. Includes persistent authentication, automatic environment setup, and reference image support for style matching.Votes: 0GitHub stars: 666
- Long Read AssemblyDe novo genome assembly from Oxford Nanopore or PacBio long reads using Flye and Canu. Produces highly contiguous assemblies suitable for complete bacterial genomes and resolving complex regions. Use when assembling genomes from ONT or PacBio reads.Votes: 0GitHub stars: 666
- Longread Sv Pipeline Gptomics BioskillsEnd-to-end workflow for detecting structural variants from long-read sequencing data. Covers ONT/PacBio alignment with minimap2 and SV calling with Sniffles or cuteSV. Use when detecting structural variants from long reads.Votes: 0GitHub stars: 666
- MacroeconomicsAnalysis of aggregate economic phenomena -- GDP measurement, inflation dynamics, unemployment theory, monetary policy (central banks, interest rates, money supply), fiscal policy (government spending, taxation, debt), and the business cycle. Covers Keynesian, monetarist, and new classical perspectives. Use when analyzing national or global economic conditions, policy debates, economic growth, recessions, or the interaction between monetary and fiscal authorities.Votes: 0GitHub stars: 666
- Map Codebase Tobihagemann TurboDeep architecture report that fans out parallel inspections across different aspects of the codebase (structure, tech stack, APIs, patterns, data flow, dependencies, testing) and synthesizes findings into a comprehensive document at .turbo/codebase-map.md and .turbo/codebase-map.html. Use when the user asks to \"map the codebase\", \"map codebase\", \"architecture report\", \"codebase overview\", \"architecture overview\", \"what am I looking at\", or \"explain this codebase\".Votes: 0GitHub stars: 666
- Markers Annotation Gptomics Bioskills 2Find marker genes and annotate cell types in single-cell RNA-seq using Seurat (R) and Scanpy (Python). Use for differential expression between clusters, identifying cluster-specific markers, scoring gene sets, and assigning cell type labels. Use when finding marker genes and annotating clusters.Votes: 0GitHub stars: 666
- Market Research Reports Aselimc Agents And SkillsGenerate comprehensive market research reports (50+ pages) in the style of top consulting firms (McKinsey, BCG, Gartner). Features professional LaTeX formatting, extensive visual generation with scientific-schematics and generate-image, deep integration with research-lookup for data gathering, and multi-framework strategic analysis including Porter's Five Forces, PESTLE, SWOT, TAM/SAM/SOM, and BCG Matrix.Votes: 0GitHub stars: 666
- Materials CharacterizationMeasurement techniques for identifying composition, microstructure, and properties of engineering materials — optical and electron microscopy, x-ray diffraction, EDS and WDS spectroscopy, thermal analysis, mechanical testing, and fractography. Covers when to use which technique, sample-preparation pitfalls, and how to build a characterization plan that answers a specific engineering question rather than accumulating data for its own sake.Votes: 0GitHub stars: 666
- Materials ChemistryStates of matter, phase transitions, kinetic molecular theory, atmospheric chemistry, green chemistry, and sustainable synthesis. Covers solid/liquid/gas/plasma properties, phase diagrams, vapor pressure, gas laws, ozone chemistry, greenhouse effect, the 12 principles of green chemistry, atom economy, solvent selection, and catalysis for sustainability. Use when reasoning about material properties, environmental chemistry, or designing greener chemical processes.Votes: 0GitHub stars: 666
- Materials SelectionSystematic materials selection for engineering design using performance indices, Ashby charts, multi-constraint optimization, and case-based reasoning. Covers the five-step Ashby method — function, objective, constraint, free variable, index — with worked examples for stiffness-limited beams, strength-limited ties, thermally shocked vessels, and minimum-cost components. Use when choosing among metals, polymers, ceramics, and composites under competing objectives.Votes: 0GitHub stars: 666
- Mathematical ModelingReal-world problem formulation, mathematical abstraction, and applied mathematics for translating between practical problems and mathematical frameworks. Covers the modeling cycle (problem identification, assumptions, formulation, analysis, validation, interpretation), Polya's framework adapted for modeling, common model types (linear, exponential, logistic, periodic, power-law), dimensional analysis (Buckingham Pi theorem), optimization (linear programming, gradient descent, constraint satis...Votes: 0GitHub stars: 666
- Mathematical Problem SolvingPolya's four-phase method applied to mathematical problems, extended with Schoenfeld's control/monitoring layer. Covers understand, devise plan, carry out, look back. Includes heuristics specific to math (specialize, generalize, vary the problem, introduce auxiliary elements) and the metacognitive discipline that separates routine computation from genuine problem solving.Votes: 0GitHub stars: 666
- Mathematical Proof LogicThe logical structure of mathematical proof -- how first-order logic, natural deduction, and semantic reasoning combine to produce rigorous mathematical arguments. Covers the logical skeleton of direct proof, contraposition, contradiction, cases, and induction; the role of definitions, lemmas, and theorems; how informal mathematical prose maps to formal deductive structure; and the difference between proof-as-object and proof-as-activity. Use when the question is "why is this a valid proof?" ...Votes: 0GitHub stars: 666
- Merip PipelineEnd-to-end MeRIP-seq analysis from FASTQ to m6A peaks and differential methylation. Use when analyzing epitranscriptomic m6A modifications from immunoprecipitation data.Votes: 0GitHub stars: 666
- Metabolite Annotation Gptomics BioskillsMetabolite identification from m/z and retention time. Covers database matching, MS/MS spectral matching, and confidence level assignment. Use when assigning compound identities to detected features in untargeted metabolomics.Votes: 0GitHub stars: 666
- MetaphysicsMetaphysical inquiry into the fundamental nature of reality. Covers ontology (what exists), substance and properties, universals vs. particulars, free will and determinism, personal identity, philosophy of mind (dualism, physicalism, functionalism, the hard problem of consciousness), causation, time, possible worlds, Buddhist metaphysics (Nagarjuna's sunyata, dependent origination, two truths doctrine), and process philosophy (Whitehead). Use when exploring questions about existence, consciou...Votes: 0GitHub stars: 666
- Methylation Pipeline Gptomics Bioskills 2End-to-end bisulfite sequencing workflow from FASTQ to differentially methylated regions. Covers Bismark alignment, methylation calling, and DMR detection with methylKit. Use when analyzing bisulfite sequencing data.Votes: 0GitHub stars: 666
- Microbiome Pipeline Gptomics Bioskills 2End-to-end 16S amplicon workflow from FASTQ reads to differential abundance. Orchestrates DADA2 ASV inference, taxonomy assignment, diversity analysis, and compositional testing with ALDEx2. Use when processing 16S/ITS amplicon data.Votes: 0GitHub stars: 666
- Mirdeep2 AnalysisDiscover novel miRNAs and quantify known miRNAs using miRDeep2 de novo prediction from small RNA-seq data. Use when identifying new miRNAs or performing comprehensive miRNA profiling with discovery.Votes: 0GitHub stars: 666
- Motif Search Gptomics Bioskills 2Find patterns, motifs, and subsequences in biological sequences using Biopython. Use when searching for transcription factor binding sites, regulatory elements, or any sequence pattern. For restriction enzyme analysis, use the restriction-analysis skill.Votes: 0GitHub stars: 666
- Msdial PreprocessingMS-DIAL-based metabolomics preprocessing as alternative to XCMS. Covers peak detection, alignment, annotation, and export for downstream analysis. Use when processing MS-DIAL output files for R/Python analysis or when preferring GUI-based preprocessing.Votes: 0GitHub stars: 666
- Nanoresearch IdeationSearch academic literature and generate research hypothesesVotes: 0GitHub stars: 666
- Neoantigen PipelineEnd-to-end neoantigen discovery from somatic variants to ranked vaccine candidates. Integrates HLA typing, MHC binding prediction, pVACtools neoantigen calling, and immunogenicity scoring. Use when identifying tumor neoantigens for personalized vaccine design or checkpoint biomarkers.Votes: 0GitHub stars: 666
- Neoantigen PredictionIdentify tumor neoantigens from somatic mutations using pVACtools for personalized cancer immunotherapy. Predict mutant peptides that bind patient HLA and may elicit T-cell responses. Use when identifying vaccine targets or checkpoint inhibitor response biomarkers from tumor sequencing data.Votes: 0GitHub stars: 666
- Network AnalysisAnalyze network structures, identify communities, measure centrality, and visualize relationships for social networks and organizational structuresVotes: 0GitHub stars: 666
- Nixtla Baseline ReviewAnalyze Nixtla baseline forecasting results (sMAPE/MASE on M4 or otherVotes: 0GitHub stars: 666
- Nixtla Event Impact ModelerQuantifies the impact of exogenous events on contract prices using TimeGPT and CausalImpact. Triggers on "event impact analysis", "model event effects", "quantify event impact", or "causal analysis".Votes: 0GitHub stars: 666
- Nixtla Market Risk AnalyzerAnalyze market risk with VaR, volatility, and position sizing using forecast data. Use when assessing investment risk. Trigger with 'analyze market risk' or 'calculate VaR'.Votes: 0GitHub stars: 666
- Osint Majiayu000 Claude Skill RegistrOpen source intelligence gathering. USE WHEN OSINT, due diligence, background check, research person, company intel, investigate. SkillSearch('osint') for docs.Votes: 0GitHub stars: 666
- OsintOpen source intelligence gathering. USE WHEN OSINT, due diligence, background check, research person, company intel, investigate. SkillSearch('osint') for docs.Votes: 0GitHub stars: 666
- Pattern RecognitionConjecture generation, sequence analysis, and experimental mathematics for mathematical discovery. Covers sequence analysis (OEIS lookups, recurrence relations, generating functions), pattern detection methods (finite differences, ratio analysis, modular patterns), conjecture generation workflow, classical integer sequences (Fibonacci, Catalan, partition numbers, Bernoulli numbers), combinatorial identities, the probabilistic method (Erdos, expected value arguments, Lovasz Local Lemma), AI-as...Votes: 0GitHub stars: 666
- Perplexity Researcher ProComplex research requiring deeper analysis, multi-step reasoning, and sophisticated source evaluation for technical, academic, or specialized domain queries needing expert-level analysis, high-stakes decisions, or multi-layered problem solving.Votes: 0GitHub stars: 666
- Photo Composition Critic Curiositech Some Claude SkillsExpert photography composition critic grounded in graduate-level visual aesthetics education, computational aesthetics research (AVA, NIMA, LAION-Aesthetics, VisualQuality-R1), and professionalVotes: 0GitHub stars: 666
- Photo Composition Critic Erichowens Some Claude Skills 2Expert photography composition critic grounded in graduate-level visual aesthetics education, computational aesthetics research (AVA, NIMA, LAION-Aesthetics, VisualQuality-R1), and professional image analysis with custom tooling. Use for image quality assessment, composition analysis, aesthetic scoring, photo critique. Activate on "photo critique", "composition analysis", "image aesthetics", "NIMA", "AVA dataset", "visual quality". NOT for photo editing/retouching (use native-app-designer), g...Votes: 0GitHub stars: 666
- Plan Research Anton Pt Algojuke D5a12defPlan technical research (enters plan mode)Votes: 0GitHub stars: 666
- Poet AnalystAnalyzes events through poetic lens using close reading, metaphor analysis, imagery, rhythm, form analysis, and attention to language's emotional and aesthetic dimensions. Provides insights on emotional truth, symbolic meaning, human experience, aesthetic impact, and expressive depth. Use when: Understanding emotional dimensions, symbolic meaning, communication impact, cultural resonance, human experience. Evaluates: Imagery, metaphor, rhythm, emotional truth, symbolic depth, aesthetic power,...Votes: 0GitHub stars: 666
- Policyengine District Analysis SkillAnalyze policy impacts for congressional districts and representatives' constituents. Use when the user mentions a specific district (NY-17, CA-52), a representative's name, or asks about geographic policy impacts at district level. Provides HuggingFace district datasets.Votes: 0GitHub stars: 666