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Claude Skills by David-Li0406
github.com/David-Li04065,064 skills17 installs250 views
- Bias AssessorAdd bias/risk-of-bias assessment fields to an extraction table and populate them consistently. **Trigger**: bias, risk-of-bias, RoB, evidence quality, 偏倚评估, 证据质量. **Use when**: systematic review 已生成 `papers/extraction_table.csv`，需要在 synthesis 前补齐偏倚/质量字段。 **Skip if**: 不是 systematic review，或还没有 `papers/extraction_table.csv`。 **Network**: none. **Guardrail**: 使用简单可复核刻度（low/unclear/high）+ 简短 notes；保持字段一致性。Votes: 0GitHub stars: 2
- Bib Cite WebCreate bibliography citations from web page URLs with automatic Wayback Machine archival and metadata extraction. Use when the user asks to cite a website, create a citation for a URL, archive and cite a web page, or generate a bibliography entry from a web address.Votes: 0GitHub stars: 2
- Bibtex Reference ManagementManage BibTeX (.bib) references and citation hygiene for LaTeX projects. Use this when asked to add/fix BibTeX entries, standardize keys, detect missing/unused citations, or improve bibliographic completeness and casing.Votes: 0GitHub stars: 2
- Bicep Api Version UpdaterBicepファイルのAzure リソースAPIバージョンを最新化。「APIバージョンを更新」「Bicepを最新化」「古いAPIバージョンをチェック」を求める場合に使用。Votes: 0GitHub stars: 2
- Bicep DiagramGenerates architecture diagrams from Azure Bicep files. Use when user has .bicep files or asks to visualize Bicep infrastructure.Votes: 0GitHub stars: 2
- Bicep ExportGenerates a set of .bicep files to replicate existing Azure infrastructureVotes: 0GitHub stars: 2
- Bicep GenerationGenerate Azure Bicep infrastructure files using the Bicep Generator MCP tools. Use when creating Azure infrastructure as code, designing cloud architecture, or generating Bicep templates.Votes: 0GitHub stars: 2
- Bicep What If Analysisazd up/provision や Bicep 変更の影響分析（what-if実行とノイズ除去）。「デプロイ前の差分確認」「破壊的変更の有無」「変更影響の確認」を求める場合に使用。Votes: 0GitHub stars: 2
- BidiADK Bidi-streaming expert with comprehensive knowledge of streaming architecture, implementation patterns, and production best practicesVotes: 0GitHub stars: 2
- Bifrost Vibecode DebuggerDebug and improve the Bifrost vibe coding experience. Use this skill when working on Bifrost platform development in Claude Code where you have access to Bifrost source code. Helps identify system bugs vs documentation issues, fix the right thing, and ensure end users have a smooth MCP-only experience.Votes: 0GitHub stars: 2
- Big ReviewRun the local `review.sh` script to get multi-model review findings, then triage and address valid issues before final validation and PR creation.Votes: 0GitHub stars: 2
- Bigquery 1Instructions for querying Google BigQuery using the bq command-line tool. Useful for running SQL queries, exploring datasets, and exporting results.Votes: 0GitHub stars: 2
- Bigquery 2BigQuery query optimization, feature engineering, and BigQuery ML models for recommendation systems. Use when writing optimized SQL queries, implementing partitioning/clustering, creating materialized views, engineering user/product/interaction features, handling schema evolution, setting up streaming with Storage Write API, or building Matrix Factorization models.Votes: 0GitHub stars: 2
- BigqueryBigQuery Expert Engineer Skill - Comprehensive guide for GoogleSQL queries, data management, performance optimization, and cost managementVotes: 0GitHub stars: 2
- Billing AutomationAutomated billing systems for SaaS subscription management, invoicing, and payment recovery. Use when implementing recurring billing, automating invoice generation, or handling failed payment dunning. Covers proration calculations, billing cycle management, usage-based billing, and tax compliance (VAT/GST).Votes: 0GitHub stars: 2
- Billing IntegrationClerk Billing and Stripe subscription management setup. Use when implementing subscriptions, configuring pricing plans, setting up billing, adding payment flows, managing entitlements, or when user mentions Clerk Billing, Stripe integration, subscription management, pricing tables, payment processing, or monetization.Votes: 0GitHub stars: 2
- Billing SdkGuide for using BillingSDK - open-source React components for pricing tables, subscription management, and billing UI with Dodo Payments.Votes: 0GitHub stars: 2
- Billing SecurityApply billing and security best practices for payment/auth integrations. Invoke when: setting up Stripe/Clerk/auth, debugging payment issues, configuring webhooks, before prod deployment, after billing incidents.Votes: 0GitHub stars: 2
- BillingDebug, edit, and fix billing endpoints. Covers legacy endpoints (attach/checkout/cancel) and the new v2 4-layer architecture (setup, compute, evaluate, execute). Use when working on billing, subscription, invoicing, or Stripe integration code.Votes: 0GitHub stars: 2
- Bimodal Score DiagnosisDiagnosing and fixing bimodal matching score distributions in MaxFuseVotes: 0GitHub stars: 2
- Dynamic AnalysisUse when you need to run a binary, trace execution, or observe runtime behavior. Runtime analysis via QEMU emulation, GDB debugging, and Frida hooking - syscall tracing (strace), breakpoints, memory inspection, function interception. Keywords - "run binary", "execute", "debug", "trace syscalls", "set breakpoint", "qemu", "gdb", "frida", "strace", "watch memory"Votes: 0GitHub stars: 2
- Static AnalysisUse when analyzing binary structure, disassembling code, or decompiling functions. Deep static analysis via radare2 (r2) and Ghidra headless - function enumeration, cross-references (xrefs), decompilation, control flow graphs. Keywords - "disassemble", "decompile", "what does this function do", "find functions", "analyze code", "r2", "ghidra", "pdg", "afl"Votes: 0GitHub stars: 2
- SynthesisUse when ready to document findings, generate a report, or summarize binary analysis results. Compiles analysis findings into structured reports - correlates facts from triage/static/dynamic phases, validates hypotheses, generates documentation with evidence chains. Keywords - "summarize findings", "generate report", "document analysis", "what did we find", "write up results", "export findings"Votes: 0GitHub stars: 2
- Tool SetupUse when reverse engineering tools are missing, not working, or need configuration. Installation guides for radare2 (r2), Ghidra, GDB, QEMU, Frida, binutils, and cross-compilation toolchains. Keywords - "install radare2", "setup ghidra", "r2 not found", "qemu missing", "tool not installed", "configure gdb", "cross-compiler"Votes: 0GitHub stars: 2
- TriageUse when first encountering an unknown binary, ELF file, executable, or firmware blob. Fast fingerprinting via rabin2 - architecture detection (ARM, x86, MIPS), ABI identification, dependency mapping, string extraction. Keywords - "what is this binary", "identify architecture", "check file type", "rabin2", "file analysis", "quick scan"Votes: 0GitHub stars: 2
- Bindcraft ReferenceBindCraft protein binder design reference. Use when working with AF2 backpropagation, binder design, interface optimization, PyRosetta metrics, design filtering, or comparing with RFdiffusion approaches.Votes: 0GitHub stars: 2
- Bio Alignment FilteringFilter alignments by flags, mapping quality, and regions using samtools view and pysam. Use when extracting specific reads, removing low-quality alignments, or subsetting to target regions.Votes: 0GitHub stars: 2
- Bio Alignment IndexingCreate and use BAI/CSI indices for BAM/CRAM files using samtools and pysam. Use when enabling random access to alignment files or fetching specific genomic regions.Votes: 0GitHub stars: 2
- Bio Alignment IoRead, write, and convert multiple sequence alignment files using Biopython Bio.AlignIO. Supports Clustal, PHYLIP, Stockholm, FASTA, Nexus, and other alignment formats for phylogenetics and conservation analysis. Use when reading, writing, or converting alignment file formats.Votes: 0GitHub stars: 2
- Bio Alignment Msa ParsingParse and analyze multiple sequence alignments using Biopython. Extract sequences, identify conserved regions, analyze gaps, work with annotations, and manipulate alignment data for downstream analysis. Use when parsing or manipulating multiple sequence alignments.Votes: 0GitHub stars: 2
- Bio Alignment PairwisePerform pairwise sequence alignment using Biopython Bio.Align.PairwiseAligner. Use when comparing two sequences, finding optimal alignments, scoring similarity, and identifying local or global matches between DNA, RNA, or protein sequences.Votes: 0GitHub stars: 2
- Bio Alignment SortingSort alignment files by coordinate or read name using samtools and pysam. Use when preparing BAM files for indexing, variant calling, or paired-end analysis.Votes: 0GitHub stars: 2
- Bio Alignment Statistics 1Generate alignment statistics using samtools flagstat, stats, depth, and coverage. Use when assessing alignment quality, calculating coverage, or generating QC reports.Votes: 0GitHub stars: 2
- Bio Alignment StatisticsCalculate alignment statistics including sequence identity, conservation scores, substitution matrices, and similarity metrics. Use when comparing alignment quality, measuring sequence divergence, and analyzing evolutionary patterns.Votes: 0GitHub stars: 2
- Bio Alignment ValidationValidate alignment quality with insert size distribution, proper pairing rates, GC bias, strand balance, and other post-alignment metrics. Use when verifying alignment data quality before variant calling or quantification.Votes: 0GitHub stars: 2
- Bio Atac Seq Atac QcQuality control metrics for ATAC-seq data including fragment size distribution, TSS enrichment, FRiP, and library complexity. Use when assessing ATAC-seq library quality before or after peak calling to identify problematic samples.Votes: 0GitHub stars: 2
- Bio Atac Seq Motif DeviationAnalyze transcription factor motif accessibility variability using chromVAR. Use when identifying which TF motifs show variable accessibility across samples or conditions in ATAC-seq data.Votes: 0GitHub stars: 2
- Bio BasecallingConvert raw Nanopore signal data (FAST5/POD5) to nucleotide sequences using Dorado basecaller. Covers model selection, GPU acceleration, modified base detection, and quality filtering. Use when processing raw Nanopore data before alignment. Note: Guppy is deprecated; use Dorado for all new analyses.Votes: 0GitHub stars: 2
- Bio Batch DownloadsDownload large datasets from NCBI efficiently using history server, batching, and rate limiting. Use when performing bulk sequence downloads, handling large query results, or production-scale data retrieval.Votes: 0GitHub stars: 2
- Bio Batch ProcessingProcess multiple sequence files in batch using Biopython. Use when working with many files, merging/splitting sequences, or automating file operations across directories.Votes: 0GitHub stars: 2
- Bio Bedgraph HandlingCreate, manipulate, and convert bedGraph files for genome browser visualization. Covers bedGraph format, conversion to/from bigWig, normalization, and signal processing. Use when handling coverage and signal tracks from ChIP-seq, ATAC-seq, or RNA-seq.Votes: 0GitHub stars: 2
- Bio Blast SearchesRun remote BLAST searches against NCBI databases using Biopython Bio.Blast. Use when identifying unknown sequences, finding homologs, or searching for sequence similarity against NCBI's nr/nt databases.Votes: 0GitHub stars: 2
- Bio Chip Seq Super EnhancersIdentifies super-enhancers from H3K27ac ChIP-seq data using ROSE and related tools. Use when studying cell identity genes, cancer-associated regulatory elements, or master transcription factor binding regions that cluster into large enhancer domains.Votes: 0GitHub stars: 2
- Bio Chipseq QcChIP-seq quality control metrics including FRiP (Fraction of Reads in Peaks), cross-correlation analysis (NSC/RSC), library complexity, and IDR (Irreproducibility Discovery Rate) for replicate concordance. Use to assess experiment quality before downstream analysis. Use when assessing ChIP-seq data quality metrics.Votes: 0GitHub stars: 2
- Bio Clinical Databases Dbsnp QueriesQuery dbSNP for rsID lookups, variant annotations, and cross-references to other databases. Use when mapping between rsIDs and genomic coordinates or retrieving basic variant information.Votes: 0GitHub stars: 2
- Bio Clinical Databases Gnomad FrequenciesQuery gnomAD for population allele frequencies to assess variant rarity. Use when filtering variants by population frequency for rare disease analysis or determining if a variant is common in the general population.Votes: 0GitHub stars: 2
- Bio Clinical Databases Myvariant QueriesQuery myvariant.info API for aggregated variant annotations from multiple databases (ClinVar, gnomAD, dbSNP, COSMIC, etc.) in a single request. Use when annotating variants with clinical and population data from multiple sources simultaneously.Votes: 0GitHub stars: 2
- Bio Clinical Databases Variant PrioritizationFilter and prioritize variants by pathogenicity, population frequency, and clinical evidence for rare disease analysis. Use when identifying candidate disease-causing variants from exome or genome sequencing.Votes: 0GitHub stars: 2
- Bio Clip Seq Binding Site AnnotationAnnotate CLIP-seq binding sites to genomic features including 3'UTR, 5'UTR, CDS, introns, and ncRNAs. Use when characterizing where an RBP binds in transcripts.Votes: 0GitHub stars: 2
- Bio Clip Seq Clip AlignmentAlign CLIP-seq reads to the genome with crosslink site awareness. Use when mapping preprocessed CLIP reads for peak calling.Votes: 0GitHub stars: 2