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Claude Skills by aiskillstore
github.com/aiskillstore3,969 skills127 installs8,640 views
- Code CraftUse when writing, reviewing, or refactoring code, or scaffolding a new project. Language-agnostic principles (types encode invariants, parse don't validate, errors as values, no mocks, earn abstractions) with dialects for Rust, TypeScript, Go, and Python.Votes: 0GitHub stars: 416
- Gh StackUse for stacked PRs with the gh-stack extension: creating, viewing, editing, pushing, submitting, syncing, rebasing, merging, or checking out a stack, or splitting multi-part work into reviewable layers. Also use whenever a stack is checked out or the user mentions stacks, branch layers, or dependent PRs.Votes: 0GitHub stars: 416
- Merge Open PrsUse when asked to "merge all open PRs" or land the open PRs together. Snapshots the open set, builds one gh stack, resolves conflicts, and merges once.Votes: 0GitHub stars: 416
- Parallel AgentsUse when parallel agents share a codebase: adding new behavior, editing or resolving conflicts in shared files (dispatchers, registries, lockfiles), finding and splitting churn hotspots, or writing AGENTS.md, CLAUDE.md, or README.Votes: 0GitHub stars: 416
- Ship ItUse when asked to "ship it", commit and open a PR, or get CI green. Verifies locally, commits, opens the PR, and loops on CI until every check passes.Votes: 0GitHub stars: 416
- Stop SlopUse for durable prose artifacts: docs, README, release notes, UI copy, comments, commit messages, PR/issue text. Skip ordinary chat replies.Votes: 0GitHub stars: 416
- Using SopsUse when a repo has .sops.yaml and secrets/<env>.env, or a pnpm secrets script. Covers reading and writing dev secrets, prod elevation, running with secrets, and the human key setup.Votes: 0GitHub stars: 416
- Caveman DiscoverFind every LLM workflow in the current repository and label it, so Caveman Cloud groups spend by what the code actually does (support-reply, nightly-digest) instead of one anonymous bucket. Use when the user pastes the Caveman discovery prompt, says "discover workflows", or asks to break LLM spend down by workflow. The repo should already route through the Caveman gateway (the caveman-setup skill does that part).Votes: 0GitHub stars: 416
- Caveman Evidence ReviewReview Caveman Cloud evidence read-only: costs, Cave Score, Cave Plan, workflows, traces, latency, errors, compression, routing, and verified savings. Use when the user asks what Caveman found, where LLM spend goes, why cost or quality changed, which workflows need attention, or asks for a trace or analytics review. Prefer Caveman MCP tools; fall back to CLI JSON.Votes: 0GitHub stars: 416
- Caveman ExploreRead-only repository explorer. Use PROACTIVELY for cold-start exploration, broad cross-file localization, or when a direct search has failed and you need to find where something lives. Skip it when the issue already names the exact file or symbol, or a previous turn already returned usable file:line evidence. Returns only compact path:line citations; its reads and greps never enter the main conversation.Votes: 0GitHub stars: 416
- Caveman LearnClose the loop on a Caveman learn report — review the ranked token sinks and apply cost-lowering fixes (trim config, offload recurring context to cavemem) with per-edit consent. Use when the user runs "caveman learn", asks to lower their agent's token cost, wants to trim a heavy CLAUDE.md, or wants to offload context they re-paste every session into cavemem.Votes: 0GitHub stars: 416
- Caveman ManageInspect Caveman Cloud's eval-gated experiment lifecycle and block unsafe execution. Use when the user asks to start, approve, cancel, promote, or roll back a Caveman experiment, or asks what action an experiment's evidence supports. Read evidence first; do not execute lifecycle mutations until server-authoritative transition and evidence gates ship.Votes: 0GitHub stars: 416
- Caveman OptimizeTurn Caveman's exact report-only repository observations into an operator-chosen optimization candidate with a paired baseline/candidate evaluation. Use when the user asks to inspect an optimization observation, evaluate a candidate change, or act on the current Caveman optimization report. Require a logged-in Caveman CLI connection and explicit approval; never infer money or actuation from a profile.Votes: 0GitHub stars: 416
- Env Doctor FreeDiagnose local project environment issues that prevent apps from starting or running. Use when the user says "why won't this run", "check my environment", "env doctor", "diagnose startup issue", "it works on my machine", or asks for help debugging missing dependencies, runtime versions, port conflicts, .env problems, file permissions, or stopped services.Votes: 0GitHub stars: 416
- Git Commit Writer FreeGenerate conventional commit messages from staged git changes. Use when the user asks to write commit message, generate commit, what should my commit say, or after the user runs git add and wants a commit message for staged files.Votes: 0GitHub stars: 416
- Readme Generator FreeGenerate polished README files from project code. Use when the user says "generate readme", "create README", "write project documentation", "make a readme", or asks for README generation, project documentation, installation docs, usage docs, API docs, badges, or repository onboarding documentation derived from an existing codebase.Votes: 0GitHub stars: 416
- Robots Sitemap ValidatorCheck robots.txt and sitemap.xml for crawl-blocking mistakes. Use when the user says "check my robots.txt", "validate my sitemap", or "is my site crawlable".Votes: 0GitHub stars: 416
- AdaptyvCloud laboratory platform for automated protein testing and validation. Use when designing proteins and needing experimental validation including binding assays, expression testing, thermostability measurements, enzyme activity assays, or protein sequence optimization. Also use for submitting experiments via API, tracking experiment status, downloading results, optimizing protein sequences for better expression using computational tools (NetSolP, SoluProt, SolubleMPNN, ESM), or managing prote...Votes: 0GitHub stars: 416
- AeonThis skill should be used for time series machine learning tasks including classification, regression, clustering, forecasting, anomaly detection, segmentation, and similarity search. Use when working with temporal data, sequential patterns, or time-indexed observations requiring specialized algorithms beyond standard ML approaches. Particularly suited for univariate and multivariate time series analysis with scikit-learn compatible APIs.Votes: 0GitHub stars: 416
- Alphafold DatabaseAccess AlphaFold 200M+ AI-predicted protein structures. Retrieve structures by UniProt ID, download PDB/mmCIF files, analyze confidence metrics (pLDDT, PAE), for drug discovery and structural biology.Votes: 0GitHub stars: 416
- AnndataData structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.Votes: 0GitHub stars: 416
- ArboretoInfer gene regulatory networks (GRNs) from gene expression data using scalable algorithms (GRNBoost2, GENIE3). Use when analyzing transcriptomics data (bulk RNA-seq, single-cell RNA-seq) to identify transcription factor-target gene relationships and regulatory interactions. Supports distributed computation for large-scale datasets.Votes: 0GitHub stars: 416
- AstropyComprehensive Python library for astronomy and astrophysics. This skill should be used when working with astronomical data including celestial coordinates, physical units, FITS files, cosmological calculations, time systems, tables, world coordinate systems (WCS), and astronomical data analysis. Use when tasks involve coordinate transformations, unit conversions, FITS file manipulation, cosmological distance calculations, time scale conversions, or astronomical data processing.Votes: 0GitHub stars: 416
- Benchling IntegrationBenchling R&D platform integration. Access registry (DNA, proteins), inventory, ELN entries, workflows via API, build Benchling Apps, query Data Warehouse, for lab data management automation.Votes: 0GitHub stars: 416
- BiopythonComprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices.Votes: 0GitHub stars: 416
- Biorxiv DatabaseEfficient database search tool for bioRxiv preprint server. Use this skill when searching for life sciences preprints by keywords, authors, date ranges, or categories, retrieving paper metadata, downloading PDFs, or conducting literature reviews.Votes: 0GitHub stars: 416
- BioservicesUnified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database analysis, ID mapping across services. For quick single-database lookups use gget; for sequence/file manipulation use biopython.Votes: 0GitHub stars: 416
- Brenda DatabaseAccess BRENDA enzyme database via SOAP API. Retrieve kinetic parameters (Km, kcat), reaction equations, organism data, and substrate-specific enzyme information for biochemical research and metabolic pathway analysis.Votes: 0GitHub stars: 416
- Cellxgene CensusQuery the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.Votes: 0GitHub stars: 416
- Chembl DatabaseQuery ChEMBL bioactive molecules and drug discovery data. Search compounds by structure/properties, retrieve bioactivity data (IC50, Ki), find inhibitors, perform SAR studies, for medicinal chemistry.Votes: 0GitHub stars: 416
- CirqGoogle quantum computing framework. Use when targeting Google Quantum AI hardware, designing noise-aware circuits, or running quantum characterization experiments. Best for Google hardware, noise modeling, and low-level circuit design. For IBM hardware use qiskit; for quantum ML with autodiff use pennylane; for physics simulations use qutip.Votes: 0GitHub stars: 416
- Citation ManagementComprehensive citation management for academic research. Search Google Scholar and PubMed for papers, extract accurate metadata, validate citations, and generate properly formatted BibTeX entries. This skill should be used when you need to find papers, verify citation information, convert DOIs to BibTeX, or ensure reference accuracy in scientific writing.Votes: 0GitHub stars: 416
- Clinical Decision SupportGenerate professional clinical decision support (CDS) documents for pharmaceutical and clinical research settings, including patient cohort analyses (biomarker-stratified with outcomes) and treatment recommendation reports (evidence-based guidelines with decision algorithms). Supports GRADE evidence grading, statistical analysis (hazard ratios, survival curves, waterfall plots), biomarker integration, and regulatory compliance. Outputs publication-ready LaTeX/PDF format optimized for drug dev...Votes: 0GitHub stars: 416
- Clinical ReportsWrite comprehensive clinical reports including case reports (CARE guidelines), diagnostic reports (radiology/pathology/lab), clinical trial reports (ICH-E3, SAE, CSR), and patient documentation (SOAP, H&P, discharge summaries). Full support with templates, regulatory compliance (HIPAA, FDA, ICH-GCP), and validation tools.Votes: 0GitHub stars: 416
- Clinicaltrials DatabaseQuery ClinicalTrials.gov via API v2. Search trials by condition, drug, location, status, or phase. Retrieve trial details by NCT ID, export data, for clinical research and patient matching.Votes: 0GitHub stars: 416
- Clinpgx DatabaseAccess ClinPGx pharmacogenomics data (successor to PharmGKB). Query gene-drug interactions, CPIC guidelines, allele functions, for precision medicine and genotype-guided dosing decisions.Votes: 0GitHub stars: 416
- Clinvar DatabaseQuery NCBI ClinVar for variant clinical significance. Search by gene/position, interpret pathogenicity classifications, access via E-utilities API or FTP, annotate VCFs, for genomic medicine.Votes: 0GitHub stars: 416
- CobrapyConstraint-based metabolic modeling (COBRA). FBA, FVA, gene knockouts, flux sampling, SBML models, for systems biology and metabolic engineering analysis.Votes: 0GitHub stars: 416
- Cosmic DatabaseAccess COSMIC cancer mutation database. Query somatic mutations, Cancer Gene Census, mutational signatures, gene fusions, for cancer research and precision oncology. Requires authentication.Votes: 0GitHub stars: 416
- DaskDistributed computing for larger-than-RAM pandas/NumPy workflows. Use when you need to scale existing pandas/NumPy code beyond memory or across clusters. Best for parallel file processing, distributed ML, integration with existing pandas code. For out-of-core analytics on single machine use vaex; for in-memory speed use polars.Votes: 0GitHub stars: 416
- Datacommons ClientWork with Data Commons, a platform providing programmatic access to public statistical data from global sources. Use this skill when working with demographic data, economic indicators, health statistics, environmental data, or any public datasets available through Data Commons. Applicable for querying population statistics, GDP figures, unemployment rates, disease prevalence, geographic entity resolution, and exploring relationships between statistical entities.Votes: 0GitHub stars: 416
- DatamolPythonic wrapper around RDKit with simplified interface and sensible defaults. Preferred for standard drug discovery including SMILES parsing, standardization, descriptors, fingerprints, clustering, 3D conformers, parallel processing. Returns native rdkit.Chem.Mol objects. For advanced control or custom parameters, use rdkit directly.Votes: 0GitHub stars: 416
- DeepchemMolecular ML with diverse featurizers and pre-built datasets. Use for property prediction (ADMET, toxicity) with traditional ML or GNNs when you want extensive featurization options and MoleculeNet benchmarks. Best for quick experiments with pre-trained models, diverse molecular representations. For graph-first PyTorch workflows use torchdrug; for benchmark datasets use pytdc.Votes: 0GitHub stars: 416
- DeeptoolsNGS analysis toolkit. BAM to bigWig conversion, QC (correlation, PCA, fingerprints), heatmaps/profiles (TSS, peaks), for ChIP-seq, RNA-seq, ATAC-seq visualization.Votes: 0GitHub stars: 416
- DenarioMultiagent AI system for scientific research assistance that automates research workflows from data analysis to publication. This skill should be used when generating research ideas from datasets, developing research methodologies, executing computational experiments, performing literature searches, or generating publication-ready papers in LaTeX format. Supports end-to-end research pipelines with customizable agent orchestration.Votes: 0GitHub stars: 416
- DiffdockDiffusion-based molecular docking. Predict protein-ligand binding poses from PDB/SMILES, confidence scores, virtual screening, for structure-based drug design. Not for affinity prediction.Votes: 0GitHub stars: 416
- Dnanexus IntegrationDNAnexus cloud genomics platform. Build apps/applets, manage data (upload/download), dxpy Python SDK, run workflows, FASTQ/BAM/VCF, for genomics pipeline development and execution.Votes: 0GitHub stars: 416
- Drugbank DatabaseAccess and analyze comprehensive drug information from the DrugBank database including drug properties, interactions, targets, pathways, chemical structures, and pharmacology data. This skill should be used when working with pharmaceutical data, drug discovery research, pharmacology studies, drug-drug interaction analysis, target identification, chemical similarity searches, ADMET predictions, or any task requiring detailed drug and drug target information from DrugBank.Votes: 0GitHub stars: 416
- Ena DatabaseAccess European Nucleotide Archive via API/FTP. Retrieve DNA/RNA sequences, raw reads (FASTQ), genome assemblies by accession, for genomics and bioinformatics pipelines. Supports multiple formats.Votes: 0GitHub stars: 416
- Ensembl DatabaseQuery Ensembl genome database REST API for 250+ species. Gene lookups, sequence retrieval, variant analysis, comparative genomics, orthologs, VEP predictions, for genomic research.Votes: 0GitHub stars: 416