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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- Diffusion Model InferenceUse when when you have multi-modal spectroscopic data (IR, Raman, UV-Vis,Votes: 0GitHub stars: 16
- Dimension Scale Linking And Cross Group IndexingUse when when exporting quantified MSI data as HDF5 containers followingVotes: 0GitHub stars: 16
- Dimensionality Reduction For Batch VisualizationUse when after data preprocessing and standardization of a metabolomicsVotes: 0GitHub stars: 16
- Dimensionality Reduction T SneUse when you have computed high-dimensional embeddings (e.Votes: 0GitHub stars: 16
- Dimple Pipeline ExecutionUse when when you have deposited mass spectrometry imaging data in NetCDFVotes: 0GitHub stars: 16
- Directory Structure Schema EnforcementUse when you have raw or partially organized natural products data fromVotes: 0GitHub stars: 16
- Disease Classification PredictionUse when you have raw LC-MS metabolomics data from multiple disease groupsVotes: 0GitHub stars: 16
- Distance Clustering In High DimensionsUse when when you have detected feature tables from two or more LC-IMS-MS/MSVotes: 0GitHub stars: 16
- Distance Geometry EmbeddingUse when when you have ionized adduct structures (in SMILES or MOL format)Votes: 0GitHub stars: 16
- Distance Matrix ClusteringUse when you have a sparse pairwise distance matrix derived from nearestVotes: 0GitHub stars: 16
- Distance Matrix Computation For SamplesUse when after batch effect removal and data integration, when you haveVotes: 0GitHub stars: 16
- Distance Matrix Generation From IndexesUse when you have pre-computed feature-hashed spectrum vectors and nearestVotes: 0GitHub stars: 16
- Distance Metric Calculation Bray Curtis Euclidean JaccardUse when you have normalized peak intensity data (or absence/presenceVotes: 0GitHub stars: 16
- Distribution Channel Validation'Use when when preparing a software release, testing contribution workflows,Votes: 0GitHub stars: 16
- Distribution Shape Adaptation In NormalizationUse when after imputation and correction, when metabolomic feature intensitiesVotes: 0GitHub stars: 16
- Diversity Visualization By TreatmentUse when you have normalized peak-abundance matrices with sample metadataVotes: 0GitHub stars: 16
- Dmodx Orthogonal Distance MetricUse when apply DModX when you have a normalized LC-MS feature matrixVotes: 0GitHub stars: 16
- Dna Adduct CharacterizationUse when when you have a collection of DNA adduct compound structuresVotes: 0GitHub stars: 16
- Docker Container ExecutionUse when you have GNPS-style MGF spectral files as input and need toVotes: 0GitHub stars: 16
- Docker Container OrchestrationUse when your analysis requires msconvert or another ProteoWizard toolVotes: 0GitHub stars: 16
- Docker Container Runtime Execution And MonitoringUse when you have a vendor mass spectrometry raw file (e.g., .raw format)Votes: 0GitHub stars: 16
- Docker Container Volume Mounting'Use when when you have vendor raw mass spectrometry files on the hostVotes: 0GitHub stars: 16
- Docker Containerized Pipeline ExecutionUse when you have raw mass spectrometry data converted to MS1 formatVotes: 0GitHub stars: 16
- Docker Environment ConfigurationUse when you need to deploy CloMet for the first time on a new system,Votes: 0GitHub stars: 16
- Docker Image DeploymentUse when when you have a containerized scientific tool available on DockerVotes: 0GitHub stars: 16
- Docker Multistage Build ExecutionUse when you need to containerize a C#-based Windows application (likeVotes: 0GitHub stars: 16
- Docker Volume Mount ConfigurationUse when deploying the ipbhalle/metfragweb container and you need toVotes: 0GitHub stars: 16
- Dockerfile Multi Stage Build ArchitectureUse when when you need to containerize a Windows-only .NET FrameworkVotes: 0GitHub stars: 16
- Document Structure VerificationUse when when uploading or ingesting paired omics project documents intoVotes: 0GitHub stars: 16
- Dom Chemodiversity CharacterizationUse when you have a formula-assigned FT-ICR MS dataset (molecular formulasVotes: 0GitHub stars: 16
- Domain Context To Application RoutingUse when when a user submits one or more MS/MS spectra and has declaredVotes: 0GitHub stars: 16
- Domain Specific Language Grammar DesignUse when when you need to enable non-programmers or domain experts toVotes: 0GitHub stars: 16
- Domain Specific Language Parsing'Use when when you have SQL-inspired query strings that encode domain-specificVotes: 0GitHub stars: 16
- Domain Specific Masst Api IntegrationUse when your research involves searching MS/MS spectra against multipleVotes: 0GitHub stars: 16
- Domain Specific Spectrum Search ImplementationUse when you have acquired one or more tandem MS/MS spectra and needVotes: 0GitHub stars: 16
- Dot Product Based Spectral ComparisonUse when when searching an unknown MS/MS spectrum against a spectralVotes: 0GitHub stars: 16
- Dot Product Similarity ComputationUse when when performing open modification spectral library searchingVotes: 0GitHub stars: 16
- Dotnet Assembly Path VerificationUse when when you have just loaded the rawrr R package and need to confirmVotes: 0GitHub stars: 16
- Dotnet Framework Compilation In ContainersUse when you have a C# GUI application targeting .NET Framework 4.8 (Windows-only)Votes: 0GitHub stars: 16
- Dotnet Framework DevelopmentUse when you need to compile and test a .NET-based metabolomics or bioinformaticsVotes: 0GitHub stars: 16
- Double Bond Positional Isomer GenerationUse when when constructing a comprehensive lipid spectral reference libraryVotes: 0GitHub stars: 16
- Drift Retention Time AlignmentUse when you have GCIMS samples exhibiting misalignment across driftVotes: 0GitHub stars: 16
- Drift Time FilteringUse when you have loaded a raw GCIMS dataset and need to isolate theVotes: 0GitHub stars: 16
- Drift Time Retention Time Distance Metric SelectionUse when after peak detection in GCIMS when you need to group detectedVotes: 0GitHub stars: 16
- Drift Time To Ccs Correlation ModelingUse when you have tunemix or other reference standards with known m/z,Votes: 0GitHub stars: 16
- Drop Down Interface Population From Filtered DataUse when you have search results from DIA mass spectrometry data containingVotes: 0GitHub stars: 16
- Dropout Regularization ApplicationUse when when training a deep neural network on mass spectrometry spectralVotes: 0GitHub stars: 16
- Drug Database Record ExtractionUse when when you have obtained a DrugBank release file (requiring accessVotes: 0GitHub stars: 16
- Dual Branch Feature FusionUse when when you have molecular input data available in two or moreVotes: 0GitHub stars: 16
- Duplicate Feature Detection And RemovalUse when you have peak-picked LC-MS data with multiple features thatVotes: 0GitHub stars: 16