Research

Merge/simplify an over-fragmented outline to hit a paper-like section budget (NO PROSE): target final ToC ~6–8 H2, fewer thicker H3. **Trigger**: outline budget, merge sections, too many sections, H3 explosion, 大纲预算, 合并小节, 大纲太碎. **Use when**: `outline/outline.yml` exists but would produce thin sections (too many H2/H3); before (or immediately after) `section-mapper`. **Skip if**: outline is already within budget and approved; or you are already drafting prose. **Network**: none. **Guardrail**...

Rewrite subsection openers so they stop reading like a generated table-of-contents: remove \"overview/narration\" stems and reduce repeated opener cadences across H3s. **Trigger**: opener variator, opener rewrite, rewrite openers, overview opener, 开头改写, 小节开头, 去overview, 去旁白. **Use when**: `writer-selfloop` is PASS but flags repeated opener stems / overview narration in `output/WRITER_SELFLOOP_TODO.md`, or the draft still has a subtle “generator cadence”. **Skip if**: you are pre-C2 (NO PROSE)...

Scaffold a LaTeX project (`latex/main.tex`, bibliography wiring, structure) from an existing Markdown draft and `citations/ref.bib`. **Trigger**: latex scaffold, md→tex, LaTeX 项目骨架, 生成 main.tex. **Use when**: 需要 LaTeX/PDF 交付（例如 arxiv-survey-latex pipeline），且 draft 已生成/已进入写作阶段。 **Skip if**: 还没有 `output/DRAFT.md`（或你不需要 LaTeX 交付）。 **Network**: none. **Guardrail**: 移除 markdown 残留（`##`, `**`, `[@...]`）；bibliography 指向 `citations/ref.bib`；不在此步骤改写内容。

Compile a LaTeX project and run basic QA (missing refs, bib errors, broken citations), producing `latex/main.pdf` and a build report. **Trigger**: latex compile, build PDF, LaTeX errors, missing refs, 编译PDF, 引用错误. **Use when**: 已有 `latex/main.tex`（通常来自 `latex-scaffold`），需要确认可编译并输出失败原因报告。 **Skip if**: 还没有 LaTeX scaffold（先跑 `latex-scaffold`）。 **Network**: none. **Guardrail**: 编译失败也要落盘 `output/LATEX_BUILD_REPORT.md`；不做“内容改写”，只做编译/QA。

Write one survey-quality paragraph from evidence packs (tension → contrast → evaluation anchor → limitation). **Trigger**: grad paragraph, paragraph micro-structure, argument paragraph, 研究生段落, 论证段落, 对比段, 段落写作. **Use when**: you are drafting `sections/S*.md` (H3 body) and want subsection-specific, evidence-bounded prose instead of templates. **Skip if**: evidence packs are missing/incomplete (fix `subsection-briefs`/`evidence-draft`/`evidence-binder` first), or `Approve C2` is not recorded in ...

Global consistency review for survey drafts: terminology, cross-section coherence, and scope/citation hygiene. Writes `output/GLOBAL_REVIEW.md` and (optionally) applies safe edits to `output/DRAFT.md`. **Trigger**: global review, consistency check, coherence audit, 术语一致性, 全局回看, 章节呼应, 拷打 writer. **Use when**: Draft exists and you want a final evidence-first coherence pass before LaTeX/PDF. **Skip if**: You are still changing the outline/mapping/notes (do those first), or prose writing is not a...

Write the survey\x27s front matter files (Abstract, Introduction, Related Work, Discussion, Conclusion) in paper voice, with high citation density and a single evidence-policy paragraph. **Trigger**: front matter writer, introduction writer, related work writer, abstract writer, discussion writer, conclusion writer, 引言, 相关工作, 摘要, 讨论, 结论. **Use when**: you are in C5 (prose allowed) and need the paper-like \"shell\" to stop the draft reading like stitched subsections. **Skip if**: `Approve C2` ...

Extract study data into a structured table (`papers/extraction_table.csv`) using the protocol’s extraction schema. **Trigger**: extraction form, extraction table, data extraction, 信息提取, 提取表. **Use when**: systematic review 在 screening 后进入 extraction（C3），需要把纳入论文按字段落到 CSV 以支持后续 synthesis。 **Skip if**: 还没有 `papers/screening_log.csv` 或 protocol 未锁定。 **Network**: none. **Guardrail**: 严格按 schema 填字段；不要在此阶段写 narrative synthesis（那是 `synthesis-writer`）。

Evidence self-loop for surveys: read evidence bindings + evidence packs, then write an actionable upstream TODO plan (which stage/skill to fix) before writing more prose. Writes `output/EVIDENCE_SELFLOOP_TODO.md`. **Trigger**: evidence self-loop, evidence loop, evidence gaps, binding gaps, blocking_missing, 证据自循环, 证据缺口回路. **Use when**: C4 outputs exist (`outline/evidence_bindings.jsonl`, `outline/evidence_drafts.jsonl`) but writing looks hollow or C5 is BLOCKED due to thin evidence. **Skip if...

Create per-subsection evidence packs (NO PROSE): claim candidates, concrete comparisons, evaluation protocol, limitations, plus citation-backed evidence snippets with provenance. **Trigger**: evidence draft, evidence pack, claim candidates, concrete comparisons, evidence snippets, provenance, 证据草稿, 证据包, 可引用事实. **Use when**: `outline/subsection_briefs.jsonl` exists and you want evidence-first section drafting where every paragraph can be backed by traceable citations/snippets. **Skip if**: `ou...

Audit the evidence supporting each claim and write gaps/concerns into `output/MISSING_EVIDENCE.md`. **Trigger**: evidence audit, missing evidence, unsupported claims, 审稿证据审计, 证据缺口. **Use when**: peer review 流程中，需要逐条检查 claim 的证据链、缺 baseline、评测薄弱点。 **Skip if**: 缺少 claims 输入（例如还没有 `output/CLAIMS.md`）。 **Network**: none. **Guardrail**: 只写“缺口/风险/下一步验证”，不要替作者补写论述或引入新主张。

Audit and rewrite evaluation/numeric claims to ensure they carry minimal protocol context (task + metric + constraint) and avoid underspecified model naming. **Trigger**: evaluation anchor checker, numeric claim hygiene, underspecified numbers, protocol context, 评测锚点检查, 数字断言, 指标上下文. **Use when**: before final merge/polish, or when reviewers would likely flag claims as underspecified (numbers without task/metric/budget), or `pipeline-auditor` warns about suspicious model naming. **Skip if**: e...

Audit-style editing pass for `output/DRAFT.md`: remove template boilerplate, improve coherence, and enforce citation anchoring. **Trigger**: polish draft, de-template, coherence pass, remove boilerplate, 润色, 去套话, 去重复, 统一术语. **Use when**: a first-pass draft exists but reads like scaffolding (repetition/ellipsis/template phrases) or needs a coherence pass before global review/LaTeX. **Skip if**: the draft already reads human-grade and passes quality gates; or prose is not approved in `DECISIONS...

Extract key claims, contributions, and assumptions from a paper/manuscript into `output/CLAIMS.md` with traceability to source locations. **Trigger**: claims extractor, extract claims, contributions, assumptions, peer review, 审稿, 主张提取. **Use when**: 审稿/评审或 evidence audit，需要把主张列表落盘并可追溯到原文位置（section/page/quote）。 **Skip if**: 没有可用的稿件/全文（例如缺少 `output/PAPER.md` 或等价文本）。 **Network**: none. **Guardrail**: 每条 claim 必须带可定位的 source pointer；区分 empirical vs conceptual claims。

Build a section-by-section claim–evidence matrix (`outline/claim_evidence_matrix.md`) from the outline and paper notes. **Trigger**: claim–evidence matrix, evidence mapping, 证据矩阵, 主张-证据对齐. **Use when**: 写 prose 之前需要把每个小节的可检验主张与证据来源显式化（outline + paper notes 已就绪）。 **Skip if**: 缺少 `outline/outline.yml` 或 `papers/paper_notes.jsonl`。 **Network**: none. **Guardrail**: bullets-only（NO PROSE）；每个 claim 至少 2 个证据来源（或显式说明例外）。

Raise citation diversity/density (NO NEW FACTS): generate an in-scope “citation budget” plan per H3 so drafts stop failing the global unique-citation gate and stop looking under-cited. **Trigger**: cite boost, citation budget, unique citations too low, add more citations, improve reference density, 引用太少, 增加引用, 引用密度. **Use when**: `pipeline-auditor` FAILs due to low unique citations, or you want to increase cite density without changing claims. **Skip if**: you need new papers (fix C1/C2 mappi...

Regression-check citation anchoring (citations stay in the same subsection) to prevent “polish drift” that breaks claim→evidence alignment. **Trigger**: citation anchoring, citation drift, regression, cite stability, 引用锚定, 引用漂移. **Use when**: after editing/polishing, you want to confirm citations did not migrate across `###` subsections. **Skip if**: you do not have a baseline anchor file yet. **Network**: none. **Guardrail**: analysis-only; do not edit content.

Write H2 chapter lead blocks (`sections/S<sec_id>_lead.md`) that preview the chapter\x27s comparison lens and connect its H3 subsections, without adding new facts. **Trigger**: chapter lead writer, section lead writer, H2 lead, lead paragraph, 章节导读, 章节导语. **Use when**: you have H2 chapters with multiple H3 subsections and the draft reads like \"paragraph islands\" across subsections. **Skip if**: the outline has no H3 subsections, or `outline/chapter_briefs.jsonl` is missing (build briefs fir...

Build per-chapter (H2) writing briefs (NO PROSE) so the final survey reads like a paper (chapter leads + cross-H3 coherence) without inflating the ToC. **Trigger**: chapter briefs, H2 briefs, chapter lead plan, section intent, 章节意图, 章节导读, H2 卡片. **Use when**: `outline/outline.yml` + `outline/subsection_briefs.jsonl` exist and you want thicker chapters (fewer headings, more logic). **Skip if**: the outline is still changing heavily (fix outline/mapping first). **Network**: none. **Guardrail**:...

Add bias/risk-of-bias assessment fields to an extraction table and populate them consistently. **Trigger**: bias, risk-of-bias, RoB, evidence quality, 偏倚评估, 证据质量. **Use when**: systematic review 已生成 `papers/extraction_table.csv`，需要在 synthesis 前补齐偏倚/质量字段。 **Skip if**: 不是 systematic review，或还没有 `papers/extraction_table.csv`。 **Network**: none. **Guardrail**: 使用简单可复核刻度（low/unclear/high）+ 简短 notes；保持字段一致性。

Retrieve paper metadata from arXiv using keyword queries and save results as JSONL (`papers/papers_raw.jsonl`). **Trigger**: arXiv, arxiv, paper search, metadata retrieval, 文献检索, 论文检索, 拉取元数据, 离线导入. **Use when**: 需要一个初始论文集合（survey/snapshot 的 Stage C1），来源为 arXiv（在线检索或离线导入 export）。 **Skip if**: 已经有可用的 `papers/papers_raw.jsonl`，或数据源不是 arXiv。 **Network**: 在线检索需要网络；离线 `--input <export.*>` 不需要网络。 **Guardrail**: 只做 metadata；不要在 `output/` 写长 prose。

Audit the workspace against the pipeline artifact contract (DONE outputs + pipeline target_artifacts). Writes `output/CONTRACT_REPORT.md`. **Trigger**: contract audit, artifact contract, missing artifacts, target_artifacts, CONTRACT_REPORT. **Use when**: you want an auditable PASS/FAIL view of whether a workspace is complete and self-contained (end of run or before sharing). **Skip if**: you are still intentionally mid-run and don’t care about completeness yet (but it’s still useful as a snap...

Download a small corpus of open-access arXiv survey/review PDFs about LLM agents and extract text for style learning. **Trigger**: agent survey corpus, ref corpus, download surveys, 学习综述写法, 下载 survey. **Use when**: you want to study how real agent surveys structure sections (6–8 H2), size subsections, and write evidence-backed comparisons. **Skip if**: you cannot download PDFs (no network) or you don't want local PDF files. **Network**: required. **Guardrail**: only download arXiv PDFs; store...

Performs quality control, citation validation, and fact-checking before human review. Use after research is complete to verify all sources and claims before production.