Data & Analytics

Load when calling CNV segments via CBS-style segmentation on a bin-level log2-ratio CSV from

Load when computing genome-assembly QC metrics — N50/N90, L50/L90, total length, contig count,

Load when computing alignment QC metrics (mapping rate, MAPQ distribution, insert size, duplicate

当重要的故事元素（角色、情节线、伏笔）10章以上未出现时自动提醒 - 防止长篇小说中的'角色消失综合症'和遗漏的情节线

Use when user mentions fantasy, magic system, or world-building for fantastical settings - provides fantasy genre conventions, magic system design patterns, and world-building frameworks

Implement real-time features using Convex reactive queries that automatically update when data changes, enabling live collaboration, instant updates, and reactive UIs without manual polling. Use when building live dashboards, implementing collaborative editing, creating chat applications, showing real-time notifications, building activity feeds, implementing presence indicators, creating reactive search, or any feature requiring instant data synchronization across clients.

Load when biologically interpreting a finished verified consensus run (consensus-domains

Load when you want a verified multi-method consensus over spatial tissue domains on a preprocessed

Use CloudBase document database Web SDK to query, create, update, and delete data. Supports complex queries, pagination, aggregation, and geolocation queries.

Generate or edit images using AI models (FLUX, Gemini). Use for scientific illustrations, diagrams, schematics, infographics, concept visualizations, and artistic images. Supports image editing to modify existing images (change colors, add/remove elements, style transfer). Useful for figures, posters, and visual explanations.

Load when placing bulk RNA-seq samples on a single-cell reference's pseudotime axis (NNLS

Load when stratifying patients by gene expression and testing for survival differences (Kaplan-Meier

Load when summarising rMATS / SUPPA2 alternative-splicing output and identifying significant

Load when checking raw FASTQ quality (Phred / GC / adapter / Q20-Q30) before alignment in

Load when summarising STAR / HISAT2 / Salmon alignment-rate logs in bulk RNA-seq. Skip when

Load when checking a bulk RNA-seq count matrix for library-size outliers, gene detection

Load when querying STRING for the protein-protein interaction subgraph induced by a bulk

Load when converting gene identifiers between Ensembl, Entrez, and HGNC symbol in a bulk

Load when running pathway / GO term enrichment on a bulk RNA-seq DE result list. Skip when

Load when estimating cell-type proportions in bulk RNA-seq samples from a single-cell or

Load when comparing gene expression between two conditions in bulk RNA-seq count data. Skip

Load when discovering gene co-expression modules and hub genes in a bulk RNA-seq cohort via

Load when removing batch effects from a multi-cohort bulk RNA-seq dataset using ComBat (R

Orchestrates the end-to-end bulk RNA-seq differential-expression pipeline from FASTQ to an annotated DE gene table, chaining fastp QC/trim, Salmon (decoy-aware) or STAR+featureCounts quantification, tximport gene-level collapse, DESeq2/edgeR/limma-voom testing, apeglm shrinkage, and VST-based visualization. Use when committing the reference release and gene-ID namespace once for the whole run, sequencing steps in the defensible order (tximport before DE, raw counts into the model, VST only fo...