Claude Skills by userInner

Unified Python interface to 40+ bioinformatics services. Use when querying multiple databases (UniProt, KEGG, ChEMBL, Reactome) in a single workflow with consistent API. Best for cross-database analysis, ID mapping across services. For quick single-database lookups use gget; for sequence/file manipulation use biopython.

Use this skill when inspecting Blender characters, rigs, poses, animation retargeting, ground contact, facing direction, or model-vs-motion alignment where screenshots alone are not enough.

Turn a one-line objective into a step-by-step construction plan for multi-session, multi-agent engineering projects. Each step has a self-contained context brief so a fresh agent can execute it cold. Includes adversarial review gate, dependency graph, parallel step detection, anti-pattern catalog, and plan mutation protocol. TRIGGER when: user requests a plan, blueprint, or roadmap for a complex multi-PR task, or describes work that needs multiple sessions. DO NOT TRIGGER when: task is comple...

Brainstorm team-level OKRs aligned with company objectives — qualitative objectives with measurable key results. Use when setting quarterly OKRs, aligning team goals with company strategy, drafting objectives, or learning how to write effective OKRs.

Use when a brand needs to discover or articulate its identity through structured multi-session interviews. Covers purpose, positioning, audience, personality, voice, narrative, and founder-brand tension across 8 modules using laddering, 5 Whys, and projective techniques. Produces a resumable session with disk-persisted state and a master brandbook (90_SYNTHESIS.md).

Build a source-derived writing style profile from real posts, essays, launch notes, docs, or site copy, then reuse that profile across content, outreach, and social workflows. Use when the user wants voice consistency without generic AI writing tropes.

Use this skill to automate visual testing and UI interaction verification using browser automation after deploying features.

Codified expertise for managing carrier portfolios, negotiating freight rates, tracking carrier performance, allocating freight, and maintaining strategic carrier relationships. Informed by transportation managers with 15+ years experience. Includes scorecarding frameworks, RFP processes, market intelligence, and compliance vetting. Use when managing carriers, negotiating rates, evaluating carrier performance, or building freight strategies.

Query the CZ CELLxGENE Census programmatically for versioned public single-cell and spatial transcriptomics data. Use when you need population-scale cell metadata, gene expression slices, Census summary counts, source H5AD URIs/downloads, embeddings, spatial Census data, or reference atlas comparisons across organisms, tissues, diseases, assays, and cell types. For analyzing your own local single-cell data use scanpy, anndata, or scvi-tools.

Cisco IOS and IOS-XE review patterns for show commands, config hierarchy, wildcard masks, ACL placement, interface hygiene, and safe change-window verification. Use when reading, writing, or reviewing Cisco IOS / IOS-XE configuration or planning a change window.

Persistent per-project memory for Claude Code. Auto-loads project context on session start, tracks sessions with git activity, and writes to native memory. Commands run deterministic Node.js scripts — behavior is consistent across model versions. Use when a project needs context to survive across Claude Code sessions instead of being re-explained each time.

Orchestrate multi-agent coding tasks via Claude DevFleet — plan projects, dispatch parallel agents in isolated worktrees, monitor progress, and read structured reports. Use when dispatching parallel coding agents across isolated worktrees and tracking their reports.

Universal coding standards, best practices, and patterns for TypeScript, JavaScript, React, and Node.js development.

Baseline cross-project coding conventions for naming, readability, immutability, and code-quality review. Use detailed frontend or backend skills for framework-specific patterns. Use when reviewing code quality or naming with no framework-specific skill that applies.

Use when scoping a competitive landscape — identifying, categorising, and score-filtering a competitor set before any benchmarking begins. Decides who counts as a competitor, which tier they belong to, and which sources to mine. First step in the three-skill competitive pipeline; precedes benchmark-methodology.

Use after benchmark-methodology has produced scored competitor profile cards. Assembles findings into a decision-grade report: landscape map, competitor profiles, benchmarking matrix, white-space analysis, strategic recommendations, and team alignment trigger questions. Final step in the three-skill competitive pipeline.

Use after benchmark-methodology has produced scored competitor profile cards. Assembles findings into a decision-grade report: landscape map, competitor profiles, benchmarking matrix, white-space analysis, strategic recommendations, and team alignment trigger questions. Final step in the three-skill competitive pipeline.

Garbage collection for your Claude Code configuration. Periodically scans ~/.claude (skills, memory, hooks, permissions, MCP servers, caches) for redundant, stale, orphaned, or low-value items, then walks the user through a confirm-each-deletion cleanup. Use when the user says "clean up my config", "config GC", "too many skills", "audit my setup", "my .claude is bloated", or asks for a periodic config review.

Audits Claude Code context window consumption across agents, skills, MCP servers, and rules. Identifies bloat, redundant components, and produces prioritized token-savings recommendations. Use when the context window is filling up too fast and the agents, skills, MCP servers, or rules consuming it need to be identified.

Patterns for continuous autonomous agent loops with quality gates, evals, and recovery controls. Use when running an agent loop that must self-check, gate on evals, and recover from failures.

[DEPRECATED - use continuous-learning-v2] Legacy v1 stop-hook skill extractor. v2 is a strict superset with instinct-based, project-scoped, hook-reliable learning. Do not invoke v1: when continuous learning, session learning, or pattern extraction is requested, route to continuous-learning-v2 instead.

Instinct-based learning system that observes sessions via hooks, creates atomic instincts with confidence scoring, and evolves them into skills/commands/agents. v2.1 adds project-scoped instincts to prevent cross-project contamination. Use when capturing lessons from a session, managing instincts, or promoting them into skills, commands, or agents.

Cost optimization patterns for LLM API usage — model routing by task complexity, budget tracking, retry logic, and prompt caching. Use when LLM spend needs to come down, or when routing tasks across model tiers and budgets.

Convene a four-voice council for ambiguous decisions, tradeoffs, and go/no-go calls. Use when multiple valid paths exist and you need structured disagreement before choosing.

Operate customer billing workflows such as subscriptions, refunds, churn triage, billing-portal recovery, and plan analysis using connected billing tools like Stripe. Use when the user needs to help a customer, inspect subscription state, or manage revenue-impacting billing operations.

Codified expertise for customs documentation, tariff classification, duty optimization, restricted party screening, and regulatory compliance across multiple jurisdictions. Informed by trade compliance specialists with 15+ years experience. Includes HS classification logic, Incoterms application, FTA utilization, and penalty mitigation. Use when handling customs clearance, tariff classification, trade compliance, import/export documentation, or duty optimization.

Build monitoring dashboards that answer real operator questions for Grafana, SigNoz, and similar platforms. Use when turning metrics into a working dashboard instead of a vanity board.

Build a fully automated AI-powered data collection agent for any public source — job boards, prices, news, GitHub, sports, anything. Runs on a schedule, enriches data with a free LLM (Gemini Flash), stores results in Notion/Sheets/Supabase, and learns from user feedback. Runs 100% free on GitHub Actions. Use when the user wants to monitor, collect, or track any public data automatically.

Use when large data ingestion, backfill, export, ETL, warehouse loading, manifest catch-up, or table synchronization needs to become much faster while preserving data correctness.

Molecular ML with diverse featurizers and pre-built datasets. Use for property prediction (ADMET, toxicity) with traditional ML or GNNs when you want extensive featurization options and MoleculeNet benchmarks. Best for quick experiments with pre-trained models, diverse molecular representations. For graph-first PyTorch workflows use torchdrug; for benchmark datasets use pytdc.

Stop hook that blocks Claude from finishing until quality checks pass. Detects rationalization patterns (surface text heuristics), stale learning logs (filesystem mtime), and low disk space. Complements self-audit by mechanically enforcing learning capture habits. Use when Claude should be mechanically blocked from declaring work finished before quality checks and learning capture actually pass.

Simulate a collaborative dev team session where multiple role-based personas (PM, Architect, Developer, QA) respond to the same problem together in one session. Use when designing a feature, reviewing a proposal, or onboarding a new initiative and you want multi-role perspective without switching agents manually.

Extract cognitive patterns and thinking fingerprints from any text. Use this skill when the user wants to analyze how someone thinks, understand cognitive style, profile writing or speech patterns, compare thinking styles between people, asks "what's my thinking style", "analyze how this person reasons", "cognitive profile", "thinking pattern", "DHDNA", "digital DNA", or wants to understand the mind behind any text. Also trigger when the user provides text and wants deeper insight into the au...

DiffDock and DiffDock-L molecular docking. Use for protein-small-molecule pose prediction from PDB or sequence plus SMILES/SDF/MOL2, batch docking, virtual screening, and pose-confidence interpretation. Not for binding affinity prediction.

Django + Celery async task patterns — configuration, task design, beat scheduling, retries, canvas workflows, monitoring, and testing. Use when adding background jobs, scheduled tasks, or async processing to a Django app.

Multi-agent orchestration using dmux (tmux pane manager for AI agents). Patterns for parallel agent workflows across Claude Code, Codex, OpenCode, and other harnesses. Use when running multiple agent sessions in parallel or coordinating multi-agent development workflows.

Multi-agent orchestration using dmux (tmux pane manager for AI agents). Patterns for parallel agent workflows across Claude Code, Codex, OpenCode, and other harnesses. Use when running multiple agent sessions in parallel or coordinating multi-agent development workflows.

Build and operate reproducible genomics workloads on DNAnexus with the dx CLI, dxpy, apps/applets, native workflows, dxCompiler, and Nextflow. Use for DNAnexus data transfers, dxapp.json development, execution monitoring, workflow import, and project automation.

Docker and Docker Compose patterns for local development, container security, networking, volume strategies, and multi-service orchestration. Use when setting up containerized development environments or reviewing Docker configurations.

Use up-to-date library and framework docs via Context7 MCP instead of training data. Activates for setup questions, API references, code examples, or when the user names a framework (e.g. React, Next.js, Prisma).

Use this skill whenever the user wants to create, read, edit, or manipulate Word documents (.docx files) or Word templates (.dotx files). Triggers include: any mention of 'Word doc', 'word document', '.docx', '.dotx', or requests to produce professional documents with formatting like tables of contents, headings, page numbers, or letterheads. Also use when extracting or reorganizing content from .docx or .dotx files, inserting or replacing images in documents, performing find-and-replace in W...

Design task-local harnesses, eval gates, and reusable skill extraction for Claude dynamic workflow mode and other adaptive agent harnesses. Use when building a task-local harness, adding eval gates, or extracting a reusable skill from ad-hoc work.

Map a described workflow to the right ECC command-GROUP with run-order and stop condition, and browse all command-group recipe families. Adds a family-grouping + run-order + when-to-stop layer on top of the flat command catalog. Advisory only. TRIGGER when the user says which commands for X, what command group runs X, show ECC recipes, list ECC pipelines, or how do I run a workflow with ECC. DO NOT TRIGGER when the user wants the task executed directly, wants a single-command deep doc (use ec...

Evidence-first ECC Tools burn and billing audit workflow. Use when investigating runaway PR creation, quota bypass, premium-model leakage, duplicate jobs, or GitHub App cost spikes in the ECC Tools repo.

Evidence-first mailbox triage, drafting, send verification, and sent-mail-safe follow-up workflow for ECC. Use when the user wants to organize email, draft or send through the real mail surface, or prove what landed in Sent.

Codified expertise for electricity and gas procurement, tariff optimization, demand charge management, renewable PPA evaluation, and multi-facility energy cost management. Informed by energy procurement managers with 15+ years experience at large commercial and industrial consumers. Includes market structure analysis, hedging strategies, load profiling, and sustainability reporting frameworks. Use when procuring energy, optimizing tariffs, managing demand charges, evaluating PPAs, or developi...

Operate long-lived agent workloads with observability, security boundaries, and lifecycle management. Use when running long-lived agent workloads that need observability, security boundaries, or lifecycle control.

Prevent silent decimal mismatch bugs across EVM chains. Covers runtime decimal lookup, chain-aware caching, bridged-token precision drift, and safe normalization for bots, dashboards, and DeFi tools. Use when handling token amounts across EVM chains, or when a balance, price, or transfer amount is off by orders of magnitude.

Neural search via Exa MCP for web, code, and company research. Use when the user needs web search, code examples, company intel, people lookup, or AI-powered deep research with Exa's neural search engine.

Unified media generation via fal.ai MCP — image, video, and audio. Covers text-to-image (Nano Banana), text/image-to-video (Seedance, Kling, Veo 3), text-to-speech (CSM-1B), and video-to-audio (ThinkSound). Use when the user wants to generate images, videos, or audio with AI.