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Claude Skills by HolobiomicsLab
github.com/HolobiomicsLab4,372 skills13 installs12,718 views
- User Interface IntegrationUse when when you have a multi-step computational workflow (e.g., peakVotes: 0GitHub stars: 16
- User Override Parameter ManagementUse when punc'data's automatic keyword-based column recognition producesVotes: 0GitHub stars: 16
- Usi Namespace ParsingUse when when you need to retrieve mass spectrometry spectrum data fromVotes: 0GitHub stars: 16
- Usi Spectrum Identifier EncodingUse when you have a Universal Spectrum Identifier (USI) string referencingVotes: 0GitHub stars: 16
- Usi Spectrum Identifier ParsingUse when when you have a USI string (e.g., mzspec:MTBLS1124:QC07.Votes: 0GitHub stars: 16
- Usi Spectrum Retrieval And LoadingUse when you have a USI accession (e.g., 'mzspec:MSV000082283:f07074:scan:5475'Votes: 0GitHub stars: 16
- Usi String Parsing And ResolutionUse when you have a USI string referencing a spectrum in an online publicVotes: 0GitHub stars: 16
- Usi String ParsingUse when when you have a USI string (e.g., mzspec:GNPS:TASK-d93bdbb5cdda40e48975e6e18a45c3ce-f.mwang87/data/Yao_Streptomyces/roseosporus/0518_s_BuOH.Votes: 0GitHub stars: 16
- Validated Link Proportional ComparisonUse when when you have scored GCF-MF (gene cluster family–molecular family)Votes: 0GitHub stars: 16
- Validation Error CategorizationUse when when a parsed mwTab file (MS or NMR experimental data) mustVotes: 0GitHub stars: 16
- Validator Tool IntegrationUse when you have a repository of structured records (e.g., mass spectrometryVotes: 0GitHub stars: 16
- Validity Constraint Enforcement For MsdataUse when when designing a custom MsBackend subclass (e.g., MsBackendTest)Votes: 0GitHub stars: 16
- Variance Estimation Within And Between GroupsUse when you have a QC-annotated LC-MS feature intensity table (CSV orVotes: 0GitHub stars: 16
- Variational Autoencoder TrainingUse when after preprocessing and normalizing joint ST/SM AnnData objectsVotes: 0GitHub stars: 16
- Vectorized Operation VerificationUse when when implementing or auditing S4 replacement methods (e.Votes: 0GitHub stars: 16
- Vendor Data StandardizationUse when you have raw MS data files directly from a vendor instrumentVotes: 0GitHub stars: 16
- Vendor Export Schema MappingUse when raw MRM lipidomics data arrives in vendor-specific export formatsVotes: 0GitHub stars: 16
- Vendor File Format Specification HandlingUse when you have a raw MSI data file from an unknown or mixed set ofVotes: 0GitHub stars: 16
- Vendor Format AbstractionUse when you have mass-spectrometry raw data files from multiple vendorsVotes: 0GitHub stars: 16
- Vendor Format Recognition And Handling'Use when when Rapid QC-MS receives vendor-format LC-MS acquisition filesVotes: 0GitHub stars: 16
- Vendor Format Routing DispatchUse when you have a collection of raw mass spectrometry data files fromVotes: 0GitHub stars: 16
- Vendor Format To Standard ConversionUse when when ingesting raw LC-MS/MS output from a mass spectrometryVotes: 0GitHub stars: 16
- Vendor Instrument Data HandlingUse when you have acquired raw mass spectrometry data in vendor-proprietaryVotes: 0GitHub stars: 16
- Vendor Mass Spectrometry File Format HandlingUse when you have one or more vendor mass spectrometry raw files (ThermoVotes: 0GitHub stars: 16
- Vendor Proprietary Format InteroperabilityUse when you have mass spectrometry raw data in a proprietary vendorVotes: 0GitHub stars: 16
- Vendor Raw File Format RecognitionUse when you have a directory containing mass spectrometry data filesVotes: 0GitHub stars: 16
- Vimms Controller Configuration And ExecutionUse when you have a set of chemical compounds (with known retention timesVotes: 0GitHub stars: 16
- Virtual Chemical Mixture GenerationUse when you need to create a synthetic chemical population for testingVotes: 0GitHub stars: 16
- Virtual Environment ConfigurationUse when you have a Python application (e.g., ROIAL-NMR) with documentedVotes: 0GitHub stars: 16
- Virtual Mass Spectrometer ConfigurationUse when when you have generated or extracted a chemical mixture (viaVotes: 0GitHub stars: 16
- Visual Pattern Recognition In Spectral DataUse when after database search algorithms have scored unknown MS samplesVotes: 0GitHub stars: 16
- Visual Studio Project ManagementUse when when you have cloned a multi-framework .NET project (e.g., MsdialWorkbenchVotes: 0GitHub stars: 16
- Visualization Comparative Performance MetricsUse when you have execution-time data for the same set of plotting operationsVotes: 0GitHub stars: 16
- Vocabulary Coverage ValidationUse when after merging separate vocabularies for distinct data modalitiesVotes: 0GitHub stars: 16
- Volcano Plot Construction From Omics DataUse when after statistical analysis (e.g., edgeR) has produced a resultsVotes: 0GitHub stars: 16
- Warping Function Comparison Across Algorithms'Use when after applying two or more LC-MS alignment algorithms (suchVotes: 0GitHub stars: 16
- Wasserstein Distance ComputationUse when when you have both an observed NMR mixture spectrum and a candidateVotes: 0GitHub stars: 16
- Web Application Documentation MiningUse when you have access to a project README or repository documentationVotes: 0GitHub stars: 16
- Web Application Endpoint MappingUse when you have a user-submitted spectrum with associated domain contextVotes: 0GitHub stars: 16
- Web Service Api IntegrationUse when when you have a parsed mass spectrum (precursor m/z, ionizationVotes: 0GitHub stars: 16
- Webassembly Local Loading SetupUse when you have downloaded a web application (e.g., COLMARvista) thatVotes: 0GitHub stars: 16
- Webworker File Access EnablingUse when you need to run a local HTML file that uses WebWorker or WebAssemblyVotes: 0GitHub stars: 16
- Weighted Loss Function OptimizationUse when when training a dual-encoder architecture (bi-encoder + cross-encoder)Votes: 0GitHub stars: 16
- Whittaker Smoother Signal DenoisingUse when after baseline correction (e.g., via asymmetric least squares)Votes: 0GitHub stars: 16
- Windows Desktop Application DeploymentUse when when you have cloned a .NET Framework or .NET Core WPF projectVotes: 0GitHub stars: 16
- Wine Windows Runtime Initialization DiagnosticsUse when you are deploying a Windows .NET application (e.g., AirdProVotes: 0GitHub stars: 16
- Within Batch Randomization By Metadata AttributeUse when you have already assigned samples to batches (inter-batch balanceVotes: 0GitHub stars: 16
- Wmy Network Prediction Confidence ScoringUse when after initial lipid candidate annotation via spectral libraryVotes: 0GitHub stars: 16
- Word Embedding Aggregation For Spectral DataUse when when you have pre-processed MS/MS spectra and a pre-trainedVotes: 0GitHub stars: 16
- Word Embedding Based Spectrum RepresentationUse when when comparing large numbers of MS/MS spectra against spectralVotes: 0GitHub stars: 16