Claude Skills by HolobiomicsLab

Use when when you have completed a weighted meta-analysis of metabolomic

Use when when you have computed fold-change and p-value statistics from

Use when when you have loaded search results from two or more DIA-MS

Use when when a project README or documentation embeds badge endpoints

Use when when you have a constraint-based metabolic model with cell-specific

Use when you have LC-IM-MS/MS raw data from sterol-containing tissue

Use when you have LC-IM-MS/MS experimental data (raw mzML or vendor format)

Use when when you have a collection of N-Me derivatized unsaturated sterol

Use when training a heavily regularized deep neural network on molecular

Use when training a deeply regularized deep neural network on a large

Use when use STOCSY when you have preprocessed 1H NMR spectral data with

Use when when implementing or initializing an MsBackend subclass to handle

Use when you have genomic clusters (GCFs) and metabolomic features (MFs)

Use when when you have paired genomics and metabolomics data from multiple

Use when you have computed raw strain correlation scores (based on shared

Use when when preparing multiomics datasets for NPLinker that combine

Use when when you have downloaded and extracted a GNPS archive (from

Use when when building a Streamlit web application that must coordinate

Use when when you need to aggregate values from multiple records in a

Use when converting intermediate JSON to a target format (e.g., mwTab)

Use when you have a JSON table (e.g., protocol records with 'type', 'id',

Use when you have structural candidates from in silico tools (SIRIUS/CANOPUS)

Use when after identifying statistically significant LC-MS features (e.g.,

Use when after you have identified statistically significant LC-MS features

Use when you have trained or loaded a deep learning model that produces

'Use when you have two or more lipid structures (in standardized lipid

Use when preprocessing open mass spectrometry libraries (OMSLs) or aggregated

Use when when you need to compare metabolic network architecture between

Use when when you have a mixed-format input query that may contain a

Use when you have 2D NMR spectral data (HSQC, HMBC, COSY) from multiple

Use when you have a set of compounds (e.g., novel NPS analogues in an

Use when you have a spectral library with structural ground truth (InChIKey

Use when when you have paired MS/MS spectra from unknown metabolites

Use when when you have a collection of mass spectra with annotated chemical

Use when when you have a set of query chemical compounds (by name or

Use when you have an unknown tandem MS spectrum and seek to assign a

Use when you have a mass spectrum of an unknown metabolite with a known

Use when you have raw structure input from diverse external databases

Use when when you need to identify compounds matching specific structural

Use when after curating structure-organism pairs from multiple source

Use when when you have loaded a structure-organism pairs table from a

Use when when you have downloaded a curated structure-organism dataset

Use when you have a curated natural products dataset (e.g., LOTUS platinum

Use when you have GNPS-style MGF spectral files from MS/MS experiments

Use when you have experimental mass spectrometry spectra (LC–QTOF or

Use when you have an experimental tandem mass spectrum (collision-induced

Use when when you have an unknown metabolite's predicted structural similarity

Use when after executing a molecular structure prediction model on spectroscopic

Use when after an NMR-based structure prediction model has generated

Use when you have a SMILES string or chemical structure and need to determine